Related Experiment Video
Updated: Sep 4, 2025

09:08
Integration of Bioinformatics Approaches and Experimental Validations to Understand the Role of Notch Signaling in Ovarian Cancer
Published on: January 12, 2020
6.8K
Protein expression profiling identifies a prognostic model for ovarian cancer
Luyang Xiong1, Jiahong Tan2, Yuchen Feng3
1Department of Critical Care Medicine, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
BMC Women'S Health
|July 15, 2022
Summary
A new six-protein risk model accurately predicts ovarian cancer survival. This model, including GSK3α/β, HSP70, MEK1, MTOR, BAD, and NDRG1, aids in disease management and prognosis monitoring for ovarian cancer patients.
Area of Science:
- Oncology
- Genomics
- Proteomics
Background:
- Ovarian cancer presents significant morbidity and mortality, impacting female health.
- Reliable prognostic models are crucial for monitoring disease progression and improving patient outcomes.
Purpose of the Study:
- To develop and validate a predictive risk model for ovarian cancer survival.
- To identify key proteins associated with overall survival in ovarian cancer patients.
Main Methods:
- Utilized TCPA and TCGA databases for protein expression and survival data.
- Employed univariate and multiple Cox regression analyses to screen proteins and construct a risk model.
- Assessed the model's predictive power and prognostic implications through validation, co-expression, and enrichment analyses.
Main Results:
- Identified 20 proteins significantly associated with ovarian cancer patient survival (p < 0.01).
- A six-protein model (GSK3α/β, HSP70, MEK1, MTOR, BAD, NDRG1) was constructed, demonstrating significant prognostic value.
- The high-risk group showed unfavorable overall and disease-specific survival (p < 0.001).
- The risk model outperformed age, tumor grade, and stage in predictive accuracy (AUC = 0.789).
Conclusions:
- The developed six-protein risk model effectively predicts ovarian cancer patient survival.
- This model serves as an independent prognostic factor and can aid in ovarian cancer disease management.
More Related Videos
Related Concept Videos
Proteomics
7.8K
A proteome is the entire set of proteins that a cell type produces. We can study proteomes using the knowledge of genomes because genes code for mRNAs, and the mRNAs encode proteins. Although mRNA analysis is a step in the right direction, not all mRNAs are translated into proteins.
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
Proteomics is the study of proteomes' function. It involves the large-scale systematic study of the proteome to denote the protein complement expressed by a genome. Scientist Mark Wilkins coined the term...
7.8K
Ribosome Profiling
3.6K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.6K

