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Published on: May 15, 2020
Leveraging unstructured electronic medical record notes to derive population-specific suicide risk models
Maxwell Levis1, Joshua Levy2, Vincent Dufort3
1VAMC White River Junction, 163 Veterans Dr., White River Junction VT, 05009 United States; Department of Psychiatry, Geisel School of Medicine, 1 Rope Ferry Rd, Hanover NH, 03755 United States.
Analyzing unstructured electronic medical record (EMR) notes using natural language processing (NLP) significantly improves suicide risk prediction accuracy. This data-driven approach identifies high-risk patients effectively.
Area of Science:
- Computational psychiatry
- Clinical informatics
- Natural Language Processing (NLP)
Background:
- Traditional suicide risk prediction models use structured Electronic Medical Record (EMR) data.
- Unstructured EMR notes contain nuanced clinical information that could enhance prediction accuracy.
Purpose of the Study:
- To develop and validate a data-driven suicide risk prediction model using NLP on unstructured EMR notes.
- To assess the predictive performance of NLP-derived models compared to existing methods.
Main Methods:
- A matched case-control study of U.S. Department of Veterans Affairs (VA) patients (2015-2016).
- Natural Language Processing (NLP) applied to a large corpus of EMR notes.
- Machine learning classification algorithms used for prediction, with Area Under the Curve (AUC) for accuracy assessment.
Main Results:
- NLP-derived models demonstrated strong predictive accuracy for suicide risk.
- The top 10% of patients identified by the risk model accounted for 29% of suicide decedents.
- The NLP model showed favorable comparison to other leading prediction methods.
Conclusions:
- Leveraging unstructured EMR notes via NLP offers a powerful tool for suicide risk prediction.
- The approach is highly implementable, requiring only text data access and open-source software.
- Future research should explore ensemble models combining NLP-derived and structured data.
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