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Anomaly segmentation in retinal images with poisson-blending data augmentation.

Hualin Wang1, Yuhong Zhou1, Jiong Zhang2

  • 1The Key Laboratory of Biomedical Information Engineering of Ministry of Education, School of Life Science and Technology, Xi'an Jiaotong University, Xi'an, 710049, China.

Medical Image Analysis
|July 17, 2022
PubMed
Summary

This study introduces a new data augmentation method and a U-Net++ model for segmenting diabetic retinopathy lesions. The approach significantly improves segmentation accuracy, aiding early diagnosis.

Keywords:
Diabetic retinopathyFully convolutional neural networkMulti-lesion segmentationPoisson-blending data augmentation

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Area of Science:

  • Ophthalmology
  • Medical Imaging
  • Computer Vision

Background:

  • Diabetic retinopathy (DR) is a major diabetes complication.
  • Accurate segmentation of DR lesions is crucial for early diagnosis.
  • Simultaneous segmentation of multiple DR lesion types is challenging due to limited annotations and lesion diversity.

Purpose of the Study:

  • To develop a novel data augmentation technique for DR lesion segmentation.
  • To propose a convolutional neural network for simultaneous multi-type DR lesion segmentation.
  • To improve the accuracy and efficiency of DR lesion detection and diagnosis.

Main Methods:

  • Proposed a Poisson-blending data augmentation (PBDA) algorithm to generate synthetic training data.
  • Developed a DSR-U-Net++ (DC-SC residual U-Net++) architecture for multi-type DR lesion segmentation.
  • Conducted extensive experiments and ablation studies to validate the methods.

Main Results:

  • PBDA algorithm effectively expanded training data, improving lesion segmentation.
  • Ablation studies showed PBDA increased mean AUPR by >5% for all lesion types.
  • DSR-U-Net++ with PBDA outperformed state-of-the-art methods on IDRiD and e-ophtha datasets.

Conclusions:

  • The proposed PBDA and DSR-U-Net++ offer an efficient solution for simultaneous multi-type DR lesion segmentation.
  • The developed method demonstrates significant performance improvements over existing approaches.
  • This approach can be adapted for generating training data in other medical anomaly segmentation tasks.