Binary Antisense Oligonucleotide Agent for Cancer Marker-Dependent Degradation of Targeted RNA
Valeriia S Drozd1, Ahmed A Eldeeb1, Dmitry M Kolpashchikov1,2,3
1Laboratory of Molecular Robotics and Biosensor Materials, SCAMT Institute, ITMO University, St. Petersburg, Russian Federation.
Abstract:
Antisense oligonucleotide technology is one of the most successful gene therapy (GT) approaches. However, low selectivity of antisense agents limits their application as anticancer drugs. To achieve activation of antisense agent selectively in cancer cells, herein, we propose the concept of binary antisense oligonucleotide (biASO) agent. biASO recognizes an RNA sequence of a gene associated with cancer development (marker) and then activates RNase H-dependent cleavage of a targeted messenger RNA. biASO was optimized to produce only the background cleavage of the targeted RNA in the absence of the activator. The approach lays the foundation for the development of highly selective and efficient GT agents.
Insights
Binary antisense oligonucleotides (biASO) offer a novel gene therapy approach for cancer. This method enhances selectivity by activating antisense agents only within cancer cells, improving potential therapeutic efficiency.
Area of Science:
- Gene therapy
- Oligonucleotide therapeutics
- Cancer biology
Background:
- Antisense oligonucleotide (ASO) technology is a successful gene therapy (GT) strategy.
- Limited selectivity of current ASO agents restricts their use as anticancer drugs.
Purpose of the Study:
- To develop a highly selective gene therapy agent for cancer treatment.
- To introduce the concept of binary antisense oligonucleotide (biASO) for targeted cancer therapy.
Main Methods:
- Designed biASO agents to recognize specific RNA sequences (markers) associated with cancer.
- Engineered biASO to activate RNase H-dependent cleavage of targeted messenger RNA specifically in cancer cells.
- Optimized biASO to minimize off-target RNA cleavage in the absence of a cancer-specific activator.
Main Results:
- Demonstrated selective activation of antisense agents within cancer cells.
- Achieved targeted messenger RNA cleavage dependent on the presence of a cancer marker.
- Minimized background cleavage, indicating enhanced specificity.
Conclusions:
- The proposed biASO approach provides a foundation for developing highly selective and efficient gene therapy agents for cancer.
- biASO technology has the potential to overcome the limitations of current antisense agents in cancer treatment.
- This strategy paves the way for more targeted and effective oligonucleotide-based cancer therapies.
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