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Spatial population genetics with fluid flow.

Roberto Benzi1, David R Nelson2, Suraj Shankar2

  • 1Department of Physics and INFN, University of Rome Tor Vergata, I-00133 Rome, Italy.

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|July 19, 2022
PubMed
Summary
This summary is machine-generated.

Fluid flows significantly impact microbial population genetics and evolution. This study reveals how flow dynamics, shear, and compressibility influence competition and evolutionary strategies in microbial communities.

Keywords:
antagonismfluid flowreaction–diffusion modelsspatial population genetics

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Area of Science:

  • Microbial Ecology
  • Population Genetics
  • Fluid Dynamics

Background:

  • Microbial population growth and evolution are influenced by fluid advection in natural environments.
  • Understanding these dynamics is crucial for marine ecology, planktonic diversity, and origin of life studies.

Purpose of the Study:

  • To review and analyze the impact of fluid flows on the competition between two genetic microbial strains.
  • To investigate how flow geometries and properties affect genetic competition and fixation.

Main Methods:

  • Solving coupled reaction-diffusion equations with advection in 1D and 2D flow geometries.
  • Analyzing flow motifs like sources, sinks, vortices, and saddles.
  • Utilizing agent-based simulations to confirm findings.

Main Results:

  • Flow shear and compressibility effects interact with selective advantage to influence genetic competition.
  • Analytical models explain the dynamics of genetic interfaces, including nucleation, coexistence, and instabilities.
  • Microbial populations can harness fluid flows for novel evolutionary strategies.

Conclusions:

  • Fluid flows play a critical role in shaping microbial evolution and spatial population genetics.
  • Flow-driven instabilities and strategies can emerge even with number fluctuations.
  • This research provides insights into microbial adaptation and diversity in flow environments.