Related Experiment Video
Updated: Sep 4, 2025

08:30
Visualization of Recombinant DNA and Protein Complexes Using Atomic Force Microscopy
Published on: July 18, 2011
22.7K
Multiple dimeric structures and strand-swap dimerization of E-cadherin in solution visualized by high-speed atomic
Shigetaka Nishiguchi1, Tadaomi Furuta2, Takayuki Uchihashi1,3,4
1Department of Creative Research, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, 444-8787 Okazaki, Japan.
Summary
Classical cadherins mediate cell adhesion through dimerization. This study reveals novel S-shaped cadherin dimers using high-speed atomic force microscopy, uncovering new dynamics in cadherin binding processes.
Area of Science:
- Cell Biology
- Biophysics
- Structural Biology
Background:
- Classical cadherins are crucial for cell-cell adhesion.
- Cadherin dimerization, involving X-dimer and strand-swap (SS-) dimer formation, is central to adhesion.
- Previous studies faced limitations in visualizing dynamic cadherin binding processes.
Purpose of the Study:
- To investigate the dynamic binding process of cadherin dimerization.
- To identify novel dimeric structures and binding states of E-cadherin ectodomains.
- To elucidate the sequential steps in cadherin dimerization.
Main Methods:
- High-speed atomic force microscopy (HS-AFM) to observe full-length E-cadherin ectodomains in solution.
- Mutational analysis to probe binding interfaces.
- Molecular modeling to complement experimental findings.
Main Results:
- Identification of multiple, previously unreported dimeric structures of E-cadherin ectodomains.
- Observation of dynamic S-shaped (or reverse S-) cadherin dimers, distinct from X- and SS-dimers.
- Direct visualization of SS-dimer formation from S-shaped and X-like dimers.
Conclusions:
- Cadherin dimerization involves more complex binding states than previously thought.
- S-shaped dimers represent a novel, dynamic intermediate in the cadherin dimerization pathway.
- HS-AFM provides unprecedented insights into the dynamic mechanisms of cadherin-mediated adhesion.
Related Concept Videos
Structure of Cadherins
3.5K
The cadherins were one of the first cell adhesion molecules discovered; the term “cadherins” is based on their calcium-dependent adhering properties. The first cadherins discovered on the epithelial, neuronal, and placental cells were named E-cadherin, P-cadherin, and N-cadherin, respectively. These classical cadherins share sequence and structural similarities. Other cadherins, including those involved in cell signaling, are grouped into non-classical cadherins. This...
3.5K
Studying the Cytoskeleton
6.4K
The cytoskeletal architecture can be studied using different microscopic and biochemical techniques. Electron microscopy was instrumental in discovering the cytoskeletal architecture around the 1960s, which allowed obtaining structural information at a high-resolution level. However, the sample preparation procedure often limits this ability in biological samples. Several protocols have been developed over the years to optimize sample preparation. In one of the protocols known as rotary...
6.4K

