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Updated: Sep 3, 2025

Design and Synthesis of a Reconfigurable DNA Accordion Rack
Published on: August 15, 2018
Exact breakpoints of the In(1)w rearrangement
Alexander Solodovnikov1, Sergey Lavrov1
1Institute of Molecular Genetics of National Research Centre, Kurchatov Institute, Moscow, RUS.
Abstract:
In(1)w has been known for decades as a classic example of a position effect variegation-causing rearrangement and has been mentioned in hundreds of publications. Nevertheless, its euchromatic breakpoint has not been localized with base-pair resolution. We performed nanopore sequencing of DNA from In(1)w homozygous flies and determined the exact position of euchromatic (chrX:2767875) and heterochromatic breakpoints of the rearrangement. The heterochromatic breakpoint is located in an unlinked part of the genome in the region, enriched in TEs (transposable elements) fragments. A set of unique piRNAs could be detected in the region.
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