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Published on: June 24, 2016
Pathogenic bacteria remodel central metabolic enzyme to build a cyclopropanol warhead
Felix Trottmann1, Keishi Ishida1, Mie Ishida-Ito1
1Department of Biomolecular Chemistry, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute (Leibniz-HKI), Jena, Germany.
Abstract:
Bacteria of the Burkholderia pseudomallei (BP) group pose a global health threat, causing the infectious diseases melioidosis, a common cause of pneumonia and sepsis, and glanders, a contagious zoonosis. A trait of BP bacteria is a conserved gene cluster coding for the biosynthesis of polyketides (malleicyprols) with a reactive cyclopropanol unit that is critical for virulence. Enzymes building this warhead represent ideal targets for antivirulence strategies but the biochemical basis of cyclopropanol formation is unknown. Here we describe the formation of the malleicyprol warhead. We show that BurG, an unusual NAD+-dependent member of the ketol-acid reductoisomerase family, constructs the strained cyclopropanol ring. Biochemical assays and a suite of eight crystal structures of native and mutated BurG with bound analogues and inhibitors provide snapshots of each step of the complex reaction mechanism, involving a concealed oxidoreduction and a C-S bond cleavage. Our findings illustrate a remarkable case of neofunctionalisation, where a biocatalyst from central metabolism has been evolutionarily repurposed for warhead production in pathogens.
Insights
Researchers uncovered how Burkholderia pseudomallei bacteria create a toxic warhead essential for causing disease. This discovery offers new avenues for developing antivirulence therapies against melioidosis and glanders.
Area of Science:
- Microbiology
- Biochemistry
- Structural Biology
Background:
- The Burkholderia pseudomallei (BP) group causes serious infectious diseases like melioidosis and glanders.
- BP bacteria possess a gene cluster for synthesizing polyketides (malleicyprols) with a virulence-critical cyclopropanol unit.
- The biochemical pathway for cyclopropanol formation and the enzymes involved remain largely unknown.
Purpose of the Study:
- To elucidate the biochemical mechanism of malleicyprol warhead formation in Burkholderia pseudomallei.
- To identify and characterize the enzyme responsible for constructing the cyclopropanol ring.
- To provide structural insights into the enzyme's catalytic mechanism.
Main Methods:
- Biochemical assays were employed to study enzyme activity.
- X-ray crystallography was used to determine the structures of the enzyme (BurG) in various states.
- Mutagenesis studies were performed on key enzyme residues.
Main Results:
- The enzyme BurG, an NAD+-dependent ketol-acid reductoisomerase family member, was identified as the cyclopropanol-forming enzyme.
- Eight crystal structures revealed the enzyme's mechanism, including a hidden oxidoreduction and C-S bond cleavage.
- Structural and biochemical data elucidated the step-by-step formation of the strained cyclopropanol ring.
Conclusions:
- BurG catalyzes the formation of the malleicyprol warhead through a novel mechanism.
- This study reveals a unique instance of enzyme neofunctionalization, repurposing a central metabolism enzyme for virulence factor production.
- Understanding this pathway opens opportunities for targeted antivirulence drug development against BP infections.
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