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Identification of Daboia siamensis venome using integrated multi-omics data
Thammakorn Saethang1, Poorichaya Somparn2,3, Sunchai Payungporn4
1Department of Computer Science, Faculty of Science, Kasetsart University, Bangkok, 10900, Thailand. thammakorn.s@ku.th.
Scientific Reports
|July 30, 2022
Summary
This study integrates genomics, transcriptomics, and proteomics to analyze Daboia siamensis snake venom. New venom proteins were identified, advancing snakebite antivenom development and therapeutic discovery.
Area of Science:
- Biochemistry
- Genomics
- Proteomics
- Toxicology
Background:
- Snakebite envenoming is a neglected tropical disease causing significant mortality and morbidity globally.
- Current antivenoms lack specificity, leading to treatment complications and high costs.
- Understanding venom composition is crucial for developing effective and affordable antivenoms.
Purpose of the Study:
- To establish and integrate multi-omics data (genomics, transcriptomics, proteomics) for comprehensive venomics analysis.
- To identify novel venom components in Daboia siamensis.
- To provide foundational data for improved antivenom production and novel therapeutic development.
Main Methods:
- Utilized mass spectrometry for in-depth venom proteome analysis.
- Integrated genomic and transcriptomic data to interpret proteomic findings.
- Applied a multi-omics approach to study the venomics of Daboia siamensis.
Main Results:
- Successfully integrated multi-omics data for a detailed study of Daboia siamensis venomics.
- Discovered previously unreported venom proteins, including hyaluronidase-1, phospholipase B, and waprin.
- Demonstrated the advantage of multi-omics data in identifying a broader spectrum of venom components.
Conclusions:
- Multi-omics data significantly enhances the depth and accuracy of venomics studies.
- The identified novel proteins offer potential targets for next-generation antivenoms.
- Findings support the development of more effective, specific, and potentially lower-cost snakebite treatments.
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