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Updated: Sep 2, 2025

Phage Phenomics: Physiological Approaches to Characterize Novel Viral Proteins
Published on: June 11, 2015
Phage endolysins are adapted to specific hosts and are evolutionarily dynamic.
Frank Oechslin1,2, Xiaojun Zhu1, Moira B Dion1,2
1Département de biochimie, de microbiologie, et de bio-informatique, Faculté des sciences et de génie, Université Laval, Québec City, Canada.
Phage endolysins, crucial for bacterial cell wall degradation, show remarkable diversity. Their exchange between phages has marginal fitness costs within strains, highlighting modular evolution and potential for antimicrobial engineering.
Area of Science:
- Microbiology
- Evolutionary Biology
- Biochemistry
Background:
- Bacteriophage endolysins degrade bacterial cell walls for viral replication.
- Endolysin diversity in phages infecting the same species is significant.
- The evolutionary implications of endolysin diversity remain underexplored.
Purpose of the Study:
- Investigate the evolutionary implications of phage endolysin diversity.
- Assess the fitness costs associated with endolysin gene exchange between phages.
- Explore the adaptive potential of endolysins in new phage/host environments.
Main Methods:
- Utilized CRISPR-Cas9 genome editing for genetic exchange of endolysin genes.
- Transferred endolysin genes between distinct lactococcal phage genomes.
- Analyzed fitness costs and adaptive mutations following gene exchange.
Main Results:
- Fitness costs of endolysin exchange were minimal within the same bacterial strain but increased between different strains/species.
- Endolysins were observed to undergo natural homologous recombination between coinfecting phages.
- Phage endolysins acquired adaptive mutations in new phage/host environments.
Conclusions:
- Phage endolysins exhibit significant evolvability, recombining and adapting to new environments.
- Evolution acts on functional modules like endolysins, explaining phage diversity and mosaicism.
- Engineered endolysins hold promise as novel antimicrobial agents.
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