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Updated: Sep 2, 2025

Single-Cell Analysis of the Expression of Pseudomonas syringae Genes within the Plant Tissue
Published on: October 6, 2022
Three semi-selective media for Pseudomonas syringae pv. maculicola and P. cannabina pv. alisalensis
1Institute for Plant Protection, National Agriculture and Food Research Organization (NARO), Kan-nondai, Tsukuba, Ibaraki, 305-8666, Japan. yasinoue@affrc.go.jp.
Abstract:
Three semi-selective media, DTarTA, SPbc, and SPamt, were developed and tested to isolate Pseudomonas syringae pv. maculicola (Psm) and P. cannabina pv. alisalensis (Pca) from Raphanus sativus seeds. DTarTA contained D-tartaric acid as a carbon source and potassium tellurite, ampicillin sodium, and methyl violet as antibiotics. DTarTA suppressed growth in 19 of the 24 pathovars from the P. syringae complex, whereas Psm and Pca grew and formed gray to black colonies. SPamt contained sucrose and peptone as nutrient sources and was supplemented with bromothymol blue and the same antibiotics present in DTarTA and Psm and Pca formed yellowish to dark brown colonies on the SPamt medium. SPbc contained sucrose and peptone and was supplemented with cephalexin and boric acid as antibiotics and Psm and Pca formed semi-translucent to white colonies on the SPbc medium. SPamt and SPbc suppressed the growth of several plant-associated bacteria (except the P. syringae complex). The growth of saprophytic bacteria in seeds on the different media was compared with that on King's B medium, using five types of commercially available Raphanus sativus seeds. The suppression rate of DTarTA was 85-99% and was lower for seeds with more saprophytic bacteria. The suppression rates of SPamt and SPbc were 90-99%. In detection tests using 10,000 seed samples mixed with Pca or Psm-contaminated seeds, it was possible to selectively isolate Psm and Pca using SPamt and SPbc, even when the colony numbers of the target bacterium constituted less than 10% of the total colonies. KEY POINTS: • Bacterial leaf spot and blight pathogens were selectively isolated from seeds. • DTarTA medium distinguishes these pathogens from P. syringae complex pathovars. • SPamp and SPbc media have different selectivity for plant-associated bacteria.
Insights
New semi-selective media, DTarTA, SPamt, and SPbc, efficiently isolate bacterial leaf spot and blight pathogens Pseudomonas syringae pv. maculicola (Psm) and P. cannabina pv. alisalensis (Pca) from Raphanus sativus seeds.
Area of Science:
- Plant pathology
- Microbiology
- Bacteriology
Background:
- Pseudomonas syringae pv. maculicola (Psm) and P. cannabina pv. alisalensis (Pca) cause significant damage to crops.
- Accurate isolation of these pathogens from host seeds is crucial for disease management and prevention.
Purpose of the Study:
- To develop and evaluate novel semi-selective culture media for the efficient isolation of Psm and Pca from Raphanus sativus seeds.
- To compare the efficacy of the new media against existing methods for bacterial pathogen detection.
Main Methods:
- Three semi-selective media (DTarTA, SPamt, SPbc) were formulated with specific carbon sources, nutrients, and antibiotic combinations.
- Media were tested for their ability to suppress non-target bacteria and selectively isolate Psm and Pca from artificially contaminated and naturally infected Raphanus sativus seeds.
- Suppression rates and isolation efficiency were evaluated against King's B medium and in large-scale seed sample tests.
Main Results:
- DTarTA medium effectively suppressed 19 out of 24 P. syringae complex pathovars, allowing Psm and Pca growth.
- SPamt and SPbc media demonstrated 90-99% suppression of saprophytic bacteria, enabling selective isolation of Psm and Pca even at low target bacterium concentrations.
- SPamt and SPbc media showed differential selectivity for plant-associated bacteria, distinguishing target pathogens from other bacterial groups.
Conclusions:
- DTarTA, SPamt, and SPbc are effective semi-selective media for isolating Psm and Pca from Raphanus sativus seeds.
- SPamt and SPbc media offer high suppression rates and excellent selectivity, making them valuable tools for bacterial plant pathogen detection and diagnostics.
- These developed media enhance the ability to identify and manage bacterial leaf spot and blight diseases in radish production.

