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Published on: May 4, 2015
Spatial multi-omic map of human myocardial infarction
Christoph Kuppe1,2, Ricardo O Ramirez Flores3,4, Zhijian Li5,6
1Institute of Experimental Medicine and Systems Biology, RWTH Aachen University, Medical Faculty, Aachen, Germany.
Insights
This study maps human cardiac remodeling after myocardial infarction (heart attack) at high resolution. It reveals disease-specific cell states and molecular changes, offering a new reference for understanding and treating heart disease.
Area of Science:
- Cardiovascular Biology
- Genomics
- Systems Biology
Background:
- Myocardial infarction (heart attack) is a major global cause of death.
- Current therapies are limited by an incomplete understanding of cardiac remodeling post-heart attack.
- Reducing late-stage mortality requires deeper insights into these remodeling processes.
Purpose of the Study:
- To create a high-resolution molecular map of human cardiac remodeling following myocardial infarction.
- To integrate multi-modal data for a comprehensive understanding of cellular and molecular changes.
- To identify disease-specific cardiac cell states and their spatial interactions.
Main Methods:
- Single-cell gene expression profiling
- Chromatin accessibility assays
- Spatial transcriptomic profiling
- Multi-modal data integration
Main Results:
- Generated an integrative map of human cardiac remodeling after myocardial infarction.
- Identified and validated disease-specific cardiac cell states across different tissue zones and time points.
- Elucidated molecular principles of cardiac tissue organization, including a cardiomyocyte and myeloid continuum post-injury.
- Revealed changes in cardiac transcriptome and epigenome, highlighting distinct injury, repair, and remodeling structures.
Conclusions:
- The study provides an essential molecular reference map for human myocardial infarction.
- The findings offer insights into the spatial context and interdependencies of cardiac cell types during disease.
- This work lays the foundation for advanced mechanistic studies and novel therapeutic strategies for cardiac disease.
Abstract:
Myocardial infarction is a leading cause of death worldwide1. Although advances have been made in acute treatment, an incomplete understanding of remodelling processes has limited the effectiveness of therapies to reduce late-stage mortality2. Here we generate an integrative high-resolution map of human cardiac remodelling after myocardial infarction using single-cell gene expression, chromatin accessibility and spatial transcriptomic profiling of multiple physiological zones at distinct time points in myocardium from patients with myocardial infarction and controls. Multi-modal data integration enabled us to evaluate cardiac cell-type compositions at increased resolution, yielding insights into changes of the cardiac transcriptome and epigenome through the identification of distinct tissue structures of injury, repair and remodelling. We identified and validated disease-specific cardiac cell states of major cell types and analysed them in their spatial context, evaluating their dependency on other cell types. Our data elucidate the molecular principles of human myocardial tissue organization, recapitulating a gradual cardiomyocyte and myeloid continuum following ischaemic injury. In sum, our study provides an integrative molecular map of human myocardial infarction, represents an essential reference for the field and paves the way for advanced mechanistic and therapeutic studies of cardiac disease.
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