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Updated: Sep 1, 2025

Visualizing DNA Damage Repair Proteins in Patient-Derived Ovarian Cancer Organoids via Immunofluorescence Assays
Published on: February 24, 2023
The Role of ATR Inhibitors in Ovarian Cancer: Investigating Predictive Biomarkers of Response
Alice Bradbury1, Frank T Zenke2, Nicola J Curtin3
1Molecular Therapeutics Program, Fox Chase Cancer Center, Philadelphia, PA 19111, USA.
Abstract:
Ataxia telangiectasia and Rad-3 related kinase (ATR) signals DNA lesions and replication stress (RS) to the S and G2/M checkpoints and DNA repair pathways making it a promising target to exploit the dysregulated DNA damage response in cancer. ATR inhibitors (ATRi) are under clinical investigation as monotherapy and in combination with other anticancer agents. Molecular determinants of sensitivity to ATRi are common in ovarian cancer, suggesting the therapeutic potential of ATRi. We investigated the cytotoxicity of the ATRi, VE-821, in a panel of human ovarian cancer cell lines. High grade serous (HGS) cell lines were significantly more sensitive to VE-821 than non-HGS (p ≤ 0.0001) but previously identified determinants of sensitivity (TP53, ATM and BRCA1) were not predictive. Only low RAD51 (p = 0.041), TopBP1 (p = 0.026) and APOBEC3B (p = 0.015) protein expression were associated with increased VE-821 sensitivity. HGS cells had increased levels of RS (pRPASer4/8 and γH2AX nuclear immunofluorescence), and elevated RS predicted sensitivity to VE-821 independently of the cell line subtype. These data suggest that functional assessment of RS biomarkers may be a better predictive biomarker of ATRi response than any single aberrant gene in ovarian cancer and potentially other cancers.
Insights
Ataxia telangiectasia and Rad-3 related kinase inhibitors (ATRi) show promise against ovarian cancer. Replication stress biomarkers, not gene mutations, better predict sensitivity to ATR inhibitors like VE-821.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Ataxia telangiectasia and Rad-3 related kinase (ATR) is crucial for DNA damage response and a target for cancer therapy.
- ATR inhibitors (ATRi) are being investigated for cancer treatment, particularly in ovarian cancer where sensitivity determinants are common.
Purpose of the Study:
- To investigate the cytotoxicity of the ATR inhibitor VE-821 in human ovarian cancer cell lines.
- To identify molecular determinants of sensitivity to VE-821, focusing on gene mutations and protein expression.
- To assess the role of replication stress (RS) as a predictive biomarker for ATRi response.
Main Methods:
- Cytotoxicity assays using VE-821 on a panel of ovarian cancer cell lines (high-grade serous vs. non-HGS).
- Analysis of previously identified sensitivity determinants (TP53, ATM, BRCA1) and protein expression levels (RAD51, TopBP1, APOBEC3B).
- Measurement of replication stress markers (pRPA Ser4/8, γH2AX) via immunofluorescence.
Main Results:
- High-grade serous (HGS) ovarian cancer cell lines were significantly more sensitive to VE-821 than non-HGS lines.
- TP53, ATM, and BRCA1 mutations were not predictive of sensitivity.
- Low RAD51, TopBP1, and APOBEC3B protein expression correlated with increased VE-821 sensitivity.
- HGS cells exhibited higher levels of replication stress, which independently predicted sensitivity to VE-821.
Conclusions:
- Replication stress biomarkers, rather than specific gene mutations, may be superior predictors of ATR inhibitor response in ovarian cancer.
- Functional assessment of replication stress could guide ATRi therapy selection in ovarian and potentially other cancers.
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