Activating IGF1R hotspot non-frameshift insertions define a novel, potentially targetable molecular subtype of

Matthew Margolis1, Tyler Janovitz2, Jason Laird2

  • 1Foundation Medicine, Inc, 150 Second Street, Cambridge, MA, 02141, USA. mmargolis27@gmail.com.

Insights

Activating mutations in the Insulin-like Growth Factor 1 Receptor (IGF1R) gene were identified in adenoid cystic carcinomas (ACCs). These specific IGF1R alterations may represent a new, treatable ACC subtype.

Area of Science:

  • Genomics and Molecular Oncology
  • Cancer Driver Mutations
  • Targeted Cancer Therapies

Background:

  • The Insulin-like Growth Factor 1 Receptor (IGF1R) is a targetable tyrosine kinase receptor.
  • Systematic characterization of IGF1R mutations, particularly activating alterations, is lacking.
  • Understanding genetic alterations is crucial for developing effective cancer treatments.

Purpose of the Study:

  • To systematically characterize mutations in the IGF1R gene across a large pan-cancer dataset.
  • To identify specific mutation hotspots and their enrichment in different cancer types.
  • To investigate the potential of IGF1R alterations as a targetable subtype in adenoid cystic carcinomas (ACCs).

Main Methods:

  • Pan-cancer analysis of 326,911 tumor samples.
  • Analysis of IGF1R alterations by variant effect prediction class, gene position, and cancer type.
  • Statistical analysis to identify significantly enriched mutation hotspots, particularly non-frameshift insertions.

Main Results:

  • 2.0% of analyzed samples (6502/326,911) harbored IGF1R alterations.
  • Two distinct hotspots for activating non-frameshift insertions were identified in IGF1R: codons 663-666 and 1034-1049.
  • These hotspot insertions were significantly enriched in ACCs (27.3-fold increase) and specific to ACCs among salivary gland tumors, often mutually exclusive with other ACC drivers.

Conclusions:

  • Non-frameshift hotspot insertions in IGF1R define a novel, potentially targetable subtype of ACC.
  • These findings highlight the importance of characterizing specific mutation patterns for precision oncology.
  • Further research is warranted to evaluate patient response to existing IGF1R inhibitors for this ACC subtype.