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Updated: Sep 1, 2025

Next Generation Sequencing for the Detection of Actionable Mutations in Solid and Liquid Tumors
Published on: September 20, 2016
Activating IGF1R hotspot non-frameshift insertions define a novel, potentially targetable molecular subtype of
Matthew Margolis1, Tyler Janovitz2, Jason Laird2
1Foundation Medicine, Inc, 150 Second Street, Cambridge, MA, 02141, USA. mmargolis27@gmail.com.
Abstract:
Activation of the tyrosine kinase receptor IGF1R is targetable with existing tyrosine kinase inhibitors (TKIs) and monoclonal antibodies, but mutations in IGF1R have not been systematically characterized. Pan-cancer analysis of 326,911 tumors identified two distinct, activating non-frameshift insertion hotspots in IGF1R, which were significantly enriched in adenoid cystic carcinomas (ACCs). IGF1R alterations from 326,911 subjects were analyzed by variant effect prediction class, position within the gene, and cancer type. 6502 (2.0%) samples harbored one or more alterations in IGF1R. Two regions were enriched for non-frameshift insertions: codons 663-666 at the hinge region of the fibronectin type 3 domain and codons 1034-1049 in the tyrosine kinase domain. Hotspot insertions were highly enriched in ACCs (27.3-fold higher than in the remainder of the pan-cancer dataset; P = 2.3 × 10-17). Among salivary gland tumors, IGF1R hotspot insertions were entirely specific to ACCs. IGF1R alterations were most often mutually exclusive with other ACC drivers (9/15, 60%). Tumors with non-frameshift hotspot IGF1R insertions represent a novel, potentially targetable subtype of ACC. Additional studies are needed to determine whether these patients respond to existing IGF1R inhibitors.
Insights
Activating mutations in the Insulin-like Growth Factor 1 Receptor (IGF1R) gene were identified in adenoid cystic carcinomas (ACCs). These specific IGF1R alterations may represent a new, treatable ACC subtype.
Area of Science:
- Genomics and Molecular Oncology
- Cancer Driver Mutations
- Targeted Cancer Therapies
Background:
- The Insulin-like Growth Factor 1 Receptor (IGF1R) is a targetable tyrosine kinase receptor.
- Systematic characterization of IGF1R mutations, particularly activating alterations, is lacking.
- Understanding genetic alterations is crucial for developing effective cancer treatments.
Purpose of the Study:
- To systematically characterize mutations in the IGF1R gene across a large pan-cancer dataset.
- To identify specific mutation hotspots and their enrichment in different cancer types.
- To investigate the potential of IGF1R alterations as a targetable subtype in adenoid cystic carcinomas (ACCs).
Main Methods:
- Pan-cancer analysis of 326,911 tumor samples.
- Analysis of IGF1R alterations by variant effect prediction class, gene position, and cancer type.
- Statistical analysis to identify significantly enriched mutation hotspots, particularly non-frameshift insertions.
Main Results:
- 2.0% of analyzed samples (6502/326,911) harbored IGF1R alterations.
- Two distinct hotspots for activating non-frameshift insertions were identified in IGF1R: codons 663-666 and 1034-1049.
- These hotspot insertions were significantly enriched in ACCs (27.3-fold increase) and specific to ACCs among salivary gland tumors, often mutually exclusive with other ACC drivers.
Conclusions:
- Non-frameshift hotspot insertions in IGF1R define a novel, potentially targetable subtype of ACC.
- These findings highlight the importance of characterizing specific mutation patterns for precision oncology.
- Further research is warranted to evaluate patient response to existing IGF1R inhibitors for this ACC subtype.
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