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YTHDC1 is downregulated by the YY1/HDAC2 complex and controls the sensitivity of ccRCC to sunitinib by targeting the
Wei Li1,2, Kun Ye1,2, Xurui Li1,2
1Department of Urology, The Second Xiangya Hospital, Central South University, 410011, Changsha, Hunan, China.
Background:
Tyrosine kinase inhibitors (TKIs) such as sunitinib are multitarget antiangiogenic agents in clear cell renal cell carcinoma (ccRCC). They are widely used in the treatment of advanced/metastatic renal cancer. However, resistance to TKIs is common in the clinic, particularly after long-term treatment. YTHDC1 is the main nuclear reader protein that binds with m6A to regulate the splicing, export and stability of mRNA. However, the specific role and corresponding mechanism of YTHDC1 in renal cancer cells are still unclear.
Methods:
The Cancer Genome Atlas (TCGA) dataset was used to study the expression of YTHDC1 in ccRCC. Cell counting kit-8 (CCK-8), wound healing, Transwell and xenograft assays were applied to explore the biological function of YTHDC1 in ccRCC. Western blot, quantitative real time PCR (RT‒qPCR), RNA immunoprecipitation PCR (RIP-qPCR), methylated RIP-qPCR (MeRIP-qPCR) and RNA sequencing (RNA-seq) analyses were applied to study the YY1/HDAC2/YTHDC1/ANXA1 axis in renal cancer cells. The CCK-8 assay and xenograft assay were used to study the role of YTHDC1 in determining the sensitivity of ccRCC to sunitinib.
Results:
Our results demonstrated that YTHDC1 is downregulated in ccRCC tissues compared with normal tissues. Low expression of YTHDC1 is associated with a poor prognosis in patients with ccRCC. Subsequently, we showed that YTHDC1 inhibits the progression of renal cancer cells via downregulation of the ANXA1/MAPK pathways. Moreover, we also showed that the YTHDC1/ANXA1 axis modulates the sensitivity of tyrosine kinase inhibitors. We then revealed that HDAC2 inhibitors resensitize ccRCC to tyrosine kinase inhibitors through the YY1/HDAC2 complex. We have identified a novel YY1/HDAC2/YTHDC1/ANXA1 axis modulating the progression and chemosensitivity of ccRCC.
Conclusion:
We identified a novel YY1/HDAC2/YTHDC1/ANXA1 axis modulating the progression and chemosensitivity of ccRCC.
Insights
YTHDC1, a key RNA-binding protein, is downregulated in clear cell renal cell carcinoma (ccRCC), hindering sunitinib treatment effectiveness. Targeting the YY1/HDAC2/YTHDC1/ANXA1 axis can restore sensitivity to tyrosine kinase inhibitors in ccRCC.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Research
Background:
- Clear cell renal cell carcinoma (ccRCC) is often treated with tyrosine kinase inhibitors (TKIs) like sunitinib.
- Resistance to TKIs is a significant clinical challenge, particularly with prolonged treatment.
- YTHDC1, a nuclear reader of m6A-modified mRNA, has an unclear role in renal cancer.
Purpose of the Study:
- To investigate the role and mechanism of YTHDC1 in ccRCC progression and sensitivity to TKIs.
- To identify molecular pathways involved in ccRCC development and TKI resistance.
Main Methods:
- Analysis of YTHDC1 expression in ccRCC using The Cancer Genome Atlas (TCGA) data.
- In vitro and in vivo assays (CCK-8, wound healing, Transwell, xenografts) to assess YTHDC1 function.
- Molecular analyses including Western blot, RT-qPCR, RIP-qPCR, MeRIP-qPCR, and RNA-seq to elucidate the YY1/HDAC2/YTHDC1/ANXA1 axis.
Main Results:
- YTHDC1 expression is downregulated in ccRCC tissues and associated with poor patient prognosis.
- YTHDC1 inhibits ccRCC progression by downregulating the ANXA1/MAPK pathway.
- The YTHDC1/ANXA1 axis influences ccRCC sensitivity to TKIs.
- HDAC2 inhibitors, via the YY1/HDAC2 complex, resensitize ccRCC to TKIs.
Conclusions:
- A novel YY1/HDAC2/YTHDC1/ANXA1 axis has been identified.
- This axis plays a critical role in modulating ccRCC progression and chemosensitivity.
- Targeting this axis offers a potential strategy to overcome TKI resistance in ccRCC.
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