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Updated: Aug 30, 2025

Identification and Quantification of Deranged Metabolites in Critically Ill Patients Using NMR-Based Metabolomics
Published on: November 29, 2024
Plasma microRNA and metabolic changes associated with pediatric acute respiratory distress syndrome: a prospective
Denis J Ohlstrom1, Christina Sul1,2, Christine U Vohwinkel1,2
1Developmental Lung Biology and Cardiovascular Pulmonary Research Laboratories, Departments of Pediatrics and Medicine, University of Colorado, Anschutz Medical Campus, Aurora, CO, USA.
Abstract:
Acute respiratory distress syndrome is a heterogeneous pathophysiological process responsible for significant morbidity and mortality in pediatric intensive care patients. Diagnosis is defined by clinical characteristics that identify the syndrome after development. Subphenotyping patients at risk of progression to ARDS could provide the opportunity for therapeutic intervention. microRNAs, non-coding RNAs stable in circulation, are a promising biomarker candidate. We conducted a single-center prospective cohort study to evaluate random forest classification of microarray-quantified circulating microRNAs in critically ill pediatric patients. We additionally selected a sub-cohort for parallel metabolomics profiling as a pilot study for concurrent use of miRNAs and metabolites as circulating biomarkers. In 35 patients (n = 21 acute respiratory distress, n = 14 control) 15 microRNAs were differentially expressed. Unsupervised random forest classification accurately grouped ARDS and control patients with an area under the curve of 0.762, which was improved to 0.839 when subset to only patients with bacterial infection. Nine metabolites were differentially abundant between acute respiratory distress and control patients (n = 4, both groups) and abundance was highly correlated with miRNA expression. Random forest classification of microRNAs differentiated critically ill pediatric patients who developed acute respiratory distress relative to those who do not. The differential expression of microRNAs and metabolites provides a strong foundation for further work to validate their use as a prognostic biomarker.
Insights
This study shows that microRNAs (miRNAs) can help identify children with acute respiratory distress syndrome (ARDS). miRNA and metabolite analysis may predict ARDS risk in critically ill children.
Area of Science:
- Pediatric critical care medicine
- Biomarker discovery
- Molecular diagnostics
Background:
- Acute respiratory distress syndrome (ARDS) is a major cause of death in pediatric intensive care units.
- Current ARDS diagnosis relies on clinical presentation after syndrome development.
- Identifying at-risk patients early could enable timely therapeutic interventions.
Purpose of the Study:
- To evaluate circulating microRNAs (miRNAs) as biomarkers for ARDS in critically ill children.
- To assess the efficacy of random forest classification for miRNA-based ARDS subphenotyping.
- To explore the combined utility of miRNAs and metabolites as prognostic biomarkers.
Main Methods:
- Prospective cohort study of 35 critically ill pediatric patients (21 ARDS, 14 control).
- Microarray analysis of circulating miRNAs and metabolomics profiling.
- Random forest classification applied to miRNA expression data.
Main Results:
- 15 differentially expressed miRNAs identified between ARDS and control groups.
- Random forest model achieved an AUC of 0.762 for ARDS classification, improving to 0.839 in bacterial infection cases.
- Nine differentially abundant metabolites correlated with miRNA expression.
Conclusions:
- Circulating miRNAs effectively differentiate pediatric ARDS patients.
- Combined miRNA and metabolite profiling shows promise for ARDS prognostication.
- Further validation is warranted for clinical application of these biomarkers.
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