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Updated: Aug 30, 2025

Author Spotlight: Quantitative Detection of DNA Protein Crosslinks and Their Post-Translational Modifications
Published on: April 21, 2023
The DNA-damage kinase ATR activates the FANCD2-FANCI clamp by priming it for ubiquitination
Tamara Sijacki1, Pablo Alcón1, Zhuo A Chen2
1MRC Laboratory of Molecular Biology, Cambridge, UK.
Abstract:
DNA interstrand cross-links are tumor-inducing lesions that block DNA replication and transcription. When cross-links are detected at stalled replication forks, ATR kinase phosphorylates FANCI, which stimulates monoubiquitination of the FANCD2-FANCI clamp by the Fanconi anemia core complex. Monoubiquitinated FANCD2-FANCI is locked onto DNA and recruits nucleases that mediate DNA repair. However, it remains unclear how phosphorylation activates this pathway. Here, we report structures of FANCD2-FANCI complexes containing phosphomimetic FANCI. We observe that, unlike wild-type FANCD2-FANCI, the phosphomimetic complex closes around DNA, independent of the Fanconi anemia core complex. The phosphomimetic mutations do not substantially alter DNA binding but instead destabilize the open state of FANCD2-FANCI and alter its conformational dynamics. Overall, our results demonstrate that phosphorylation primes the FANCD2-FANCI clamp for ubiquitination, showing how multiple posttranslational modifications are coordinated to control DNA repair.
Insights
DNA interstrand cross-links trigger ATR kinase to phosphorylate FANCI, priming the FANCD2-FANCI DNA repair clamp for ubiquitination. This phosphorylation controls DNA repair coordination, crucial for preventing tumor formation.
Area of Science:
- Molecular Biology
- DNA Repair Mechanisms
- Cancer Biology
Background:
- DNA interstrand cross-links are genotoxic lesions that impede DNA replication and transcription.
- The Fanconi anemia pathway, involving ATR kinase, FANCI, and FANCD2, is critical for repairing these cross-links.
- The precise mechanism by which phosphorylation activates this DNA repair pathway remained unclear.
Purpose of the Study:
- To elucidate the structural and functional consequences of FANCI phosphorylation in the DNA repair process.
- To understand how phosphorylation primes the FANCD2-FANCI complex for subsequent ubiquitination and DNA repair.
Main Methods:
- X-ray crystallography to determine the structures of FANCD2-FANCI complexes with phosphomimetic FANCI.
- Biophysical analyses to assess DNA binding and conformational dynamics of the complexes.
Main Results:
- Phosphomimetic mutations in FANCI cause the FANCD2-FANCI complex to adopt a closed conformation around DNA, independent of the Fanconi anemia core complex.
- These mutations destabilize the open state of FANCD2-FANCI and alter its conformational dynamics without significantly affecting DNA binding.
- Phosphorylation acts as a priming step, preparing the FANCD2-FANCI clamp for ubiquitination.
Conclusions:
- Phosphorylation of FANCI is a key regulatory event that primes the FANCD2-FANCI complex for ubiquitination.
- This study reveals the coordinated action of posttranslational modifications in controlling DNA repair pathways.
- Understanding this mechanism provides insights into preventing DNA cross-link-induced tumorigenesis.
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