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Updated: Aug 29, 2025

Genome-Wide Analysis of DNA Methylation in Gastrointestinal Cancer
Published on: September 18, 2020
CPEB3 suppresses gastric cancer progression by inhibiting ADAR1-mediated RNA editing via localizing ADAR1 mRNA to P
Jian Chen1, Lu Li2, Tian-Yu Liu3
1Center for Gastrointestinal Surgery, The First Affiliated Hospital of Sun Yat-sen University, Guangzhou, Guangdong, China.
Abstract:
Deciphering the crosstalk between RNA-binding proteins and corresponding RNAs will provide a better understanding of gastric cancer (GC) progression. The comprehensive bioinformatics study identified cytoplasmic polyadenylation element-binding protein 3 (CPEB3) might play a vital role in GC progression. Then we found CPEB3 was downregulated in GC and correlated with prognosis. In addition, CPEB3 suppressed GC cell proliferation, invasion and migration in vitro, as well as tumor growth and metastasis in vivo. Mechanistic study demonstrated CPEB3 interacted with 3'-UTR of ADAR1 mRNA through binding to CPEC nucleotide element, and then inhibited its translation by localizing it to processing bodies (P bodies), eventually leading to the suppression of ADAR1-mediated RNA editing. Microscale thermophoresis assay further revealed that the direct interaction between CPEB3 and GW182, the P-body's major component, was through the 440-698AA region of CPEB3 binding to the 403-860AA region of GW182. Finally, AAV9-CPEB3 was developed and administrated in mouse models to assess its potential value in gene therapy. We found AAV9-CPEB3 inhibited GC growth and metastasis. Besides, AAV9-CPEB3 induced hydropic degeneration in mouse liver, but did not cause kidney damage. These findings concluded that CPEB3 suppresses GC progression by inhibiting ADAR1-mediated RNA editing via localizing ADAR1 mRNA to P bodies.
Insights
Cytoplasmic polyadenylation element-binding protein 3 (CPEB3) suppresses gastric cancer (GC) by inhibiting ADAR1 RNA editing. Gene therapy using AAV9-CPEB3 shows potential for treating GC.
Area of Science:
- Molecular Biology
- Oncology
- Gene Therapy
Background:
- Gastric cancer (GC) progression involves complex interactions between RNA-binding proteins and RNAs.
- Understanding these interactions is crucial for developing effective GC therapies.
Purpose of the Study:
- To investigate the role of cytoplasmic polyadenylation element-binding protein 3 (CPEB3) in gastric cancer progression.
- To elucidate the underlying molecular mechanisms by which CPEB3 affects GC.
Main Methods:
- Bioinformatic analysis to identify potential GC-related RNA-binding proteins.
- In vitro and in vivo experiments to assess CPEB3's function in GC cells and tumor models.
- Biochemical assays (e.g., microscale thermophoresis) to confirm protein-RNA interactions.
- Development and testing of Adeno-Associated Virus serotype 9 (AAV9)-CPEB3 for gene therapy.
Main Results:
- CPEB3 was found to be downregulated in GC and correlated with poor prognosis.
- CPEB3 suppressed GC cell proliferation, invasion, migration, tumor growth, and metastasis.
- CPEB3 directly interacted with ADAR1 mRNA, inhibiting its translation and subsequent RNA editing by sequestering it in P bodies.
- AAV9-CPEB3 administration inhibited GC growth and metastasis in mouse models, with observed liver toxicity but no kidney damage.
Conclusions:
- CPEB3 acts as a tumor suppressor in gastric cancer by inhibiting ADAR1-mediated RNA editing.
- The mechanism involves CPEB3-mediated localization of ADAR1 mRNA to processing bodies (P bodies).
- AAV9-CPEB3 demonstrates therapeutic potential for GC, warranting further investigation into its safety profile.
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