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Machine learning-based improvement of MDS-CBC score brings platelets into the limelight to optimize smear review in
Jaja Zhu1, Pierre Lemaire2, Stéphanie Mathis2
1Service d'Hématologie-Immunologie-Transfusion, Hôpitaux Universitaires Paris Ile De France Ouest, APHP. Paris Saclay, Université Versailles Saint Quentin-Université Paris Saclay, Paris, France.
Background:
Myelodysplastic syndromes (MDS) are clonal hematopoietic diseases of the elderly characterized by chronic cytopenias, ineffective and dysplastic haematopoiesis, recurrent genetic abnormalities and increased risk of progression to acute myeloid leukemia. A challenge of routine laboratory Complete Blood Counts (CBC) is to correctly identify MDS patients while simultaneously avoiding excess smear reviews. To optimize smear review, the latest generations of hematology analyzers provide new cell population data (CPD) parameters with an increased ability to screen MDS, among which the previously described MDS-CBC Score, based on Absolute Neutrophil Count (ANC), structural neutrophil dispersion (Ne-WX) and mean corpuscular volume (MCV). Ne-WX is increased in the presence of hypogranulated/degranulated neutrophils, a hallmark of dysplasia in the context of MDS or chronic myelomonocytic leukemia. Ne-WX and MCV are CPD derived from leukocytes and red blood cells, therefore the MDS-CBC score does not include any platelet-derived CPD. We asked whether this score could be improved by adding the immature platelet fraction (IPF), a CPD used as a surrogate marker of dysplastic thrombopoiesis.
Methods:
Here, we studied a cohort of more than 500 individuals with cytopenias, including 168 MDS patients. In a first step, we used Breiman's random forests algorithm, a machine-learning approach, to identify the most relevant parameters for MDS prediction. We then designed Classification And Regression Trees (CART) to evaluate, using resampling, the effect of model tuning parameters on performance and choose the "optimal" model across these parameters.
Results:
Using random forests algorithm, we identified Ne-WX and IPF as the strongest discriminatory predictors, explaining 37 and 33% of diagnoses respectively. To obtain "simplified" trees, which could be easily implemented into laboratory middlewares, we designed CART combining MDS-CBC score and IPF. Optimal results were obtained using a MDS-CBC score threshold equal to 0.23, and an IPF threshold equal to 3%.
Conclusions:
We propose an extended MDS-CBC score, including CPD from the three myeloid lineages, to improve MDS diagnosis on routine laboratory CBCs and optimize smear reviews.
Insights
This study enhances the Myelodysplastic Syndromes (MDS) Complete Blood Count (CBC) score by incorporating immature platelet fraction (IPF). This improved score aids in better identifying MDS patients and optimizing laboratory smear reviews.
Area of Science:
- Hematology
- Clinical Pathology
- Machine Learning in Diagnostics
Background:
- Myelodysplastic syndromes (MDS) are clonal hematopoietic disorders common in the elderly, marked by ineffective blood cell production and a risk of progressing to acute myeloid leukemia.
- Routine Complete Blood Counts (CBC) face challenges in accurately identifying MDS patients while minimizing unnecessary manual smear reviews.
- Existing hematology analyzers offer new cell population data (CPD) parameters, including the MDS-CBC Score (based on Absolute Neutrophil Count, neutrophil dispersion, and mean corpuscular volume), to screen for MDS.
Purpose of the Study:
- To evaluate if adding the immature platelet fraction (IPF), a marker of dysplastic thrombopoiesis, to the existing MDS-CBC score can improve the diagnostic accuracy for Myelodysplastic Syndromes.
- To determine the most effective parameters for predicting MDS using machine learning approaches.
Main Methods:
- A cohort of over 500 individuals with cytopenias, including 168 MDS patients, was analyzed.
- Breiman's random forests algorithm was employed to identify key predictive parameters for MDS.
- Classification And Regression Trees (CART) were developed and optimized using resampling to create a practical diagnostic model.
Main Results:
- The random forests analysis identified Ne-WX (neutrophil dispersion) and IPF (immature platelet fraction) as the strongest predictors of MDS, accounting for 37% and 33% of diagnoses, respectively.
- A simplified Classification And Regression Tree model combining the MDS-CBC score and IPF was developed for easy implementation in laboratory systems.
- Optimal performance was achieved with an MDS-CBC score threshold of 0.23 and an IPF threshold of 3%.
Conclusions:
- An extended MDS-CBC score, incorporating cell population data from all three myeloid lineages (neutrophils, red blood cells, and platelets), offers improved accuracy for diagnosing MDS.
- This enhanced score can optimize the use of routine laboratory CBCs and refine the process of manual smear reviews in clinical settings.
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