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Updated: Aug 29, 2025

Simultaneous Measurement of HDAC1 and HDAC6 Activity in HeLa Cells Using UHPLC-MS
Published on: August 10, 2017
Current trends in development of HDAC-based chemotherapeutics
Narges Cheshmazar1, Maryam Hamzeh-Mivehroud2, Hojjatollah Nozad Charoudeh3
1Student Research Committee, Tabriz University of Medical Sciences, Tabriz, Iran; Biotechnology Research Center, Tabriz University of Medical Sciences, Tabriz, Iran; Department of Medicinal Chemistry, School of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran.
Background:
Histone deacetylases (HDACs) are one of the essential epigenetic targets in cancer treatment. These enzymes play key roles in post-translation modification (PTM) and gene expression, and consequently, their inhibitors are about to find their place in pharmacotherapy. Most of the currently approved HDAC inhibitors (HDACIs) are wide-spectrum with poor clinical outcomes and numerous side effects. Therefore, new generations of HDAC-based chemotherapeutics with better clinical outcomes are emerging, e.g., isoform-selective inhibitors, multitargeted HDACIs, as well as HDAC degraders.
Aim:
The review intended to introduce drug design approaches which were used for designing novel agents which can be beneficial in the process of finding new and more effective HDACI-based therapeutics.
Methods:
PubMed and other databases were searched for literature regarding the structure-function of HDAC isoforms, and strategies used to design HDAC inhibitors. Also, all clinical trials available from the ClinicalTrials site for years 2021-2022 were investigated.
Key Findings:
It is expected that the future of drug discovery projects in HDAC field will concentrate mostly on issues such as isoform-selectivity, multitargeted HDAC inhibitors and HDAC degraders. Deeper knowledge of the 3D structure of HDACs complexed with inhibitors and extensive delineation of biological roles of HDACs are needed for efficient investigations leading to the discovery of novel potent inhibitors.
Significance:
Histone deacetylases (HDACs) are one of the important epigenetic targets in cancer treatment drug discovery. Comprehending the structure of HDAC isoforms along with applied drug design strategies can inspire new ideas.
Insights
New histone deacetylase inhibitors (HDACIs) are emerging, focusing on isoform-selectivity and targeted degradation for improved cancer treatment. Understanding HDAC structure and function drives the design of more effective epigenetic therapies.
Area of Science:
- Epigenetics
- Medicinal Chemistry
- Oncology
Background:
- Histone deacetylases (HDACs) are crucial epigenetic targets in cancer therapy.
- Current broad-spectrum HDAC inhibitors (HDACIs) have limited efficacy and significant side effects.
- Next-generation HDAC therapeutics include isoform-selective inhibitors, multitargeted agents, and HDAC degraders.
Purpose of the Study:
- To review drug design strategies for novel histone deacetylase inhibitor-based therapeutics.
- To highlight approaches for developing more effective and selective HDAC inhibitors.
Main Methods:
- Literature search of PubMed and other databases for HDAC structure-function and inhibitor design.
- Review of clinical trials for HDAC inhibitors from 2021-2022.
Main Results:
- Future HDAC drug discovery will emphasize isoform-selectivity, multitargeted inhibitors, and HDAC degraders.
- In-depth knowledge of HDAC 3D structures and biological roles is essential for designing potent inhibitors.
Conclusions:
- HDACs are significant epigenetic targets in cancer drug discovery.
- Understanding HDAC isoform structures and drug design strategies can foster innovation in developing novel cancer therapeutics.
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