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Updated: Aug 28, 2025

Production of Pseudotyped Particles to Study Highly Pathogenic Coronaviruses in a Biosafety Level 2 Setting
Published on: March 1, 2019
Autophagy-linked plasma and lysosomal membrane protein PLAC8 is a key host factor for SARS-CoV-2 entry into human
Alejandro P Ugalde1, Gabriel Bretones1, David Rodríguez1,2
1Departamento de Bioquímica y Biología Molecular, Instituto Universitario de Oncología (IUOPA), Universidad de Oviedo, Oviedo, Spain.
Abstract:
Better understanding on interactions between SARS-CoV-2 and host cells should help to identify host factors that may be targetable to combat infection and COVID-19 pathology. To this end, we have conducted a genome-wide CRISPR/Cas9-based loss-of-function screen in human lung cancer cells infected with SARS-CoV-2-pseudotyped lentiviruses. Our results recapitulate many findings from previous screens that used full SARS-CoV-2 viruses, but also unveil two novel critical host factors: the lysosomal efflux transporter SPNS1 and the plasma and lysosomal membrane protein PLAC8. Functional experiments with full SARS-CoV-2 viruses confirm that loss-of-function of these genes impairs viral entry. We find that PLAC8 is a key limiting host factor, whose overexpression boosts viral infection in eight different human lung cancer cell lines. Using single-cell RNA-Seq data analyses, we demonstrate that PLAC8 is highly expressed in ciliated and secretory cells of the respiratory tract, as well as in gut enterocytes, cell types that are highly susceptible to SARS-CoV-2 infection. Proteomics and cell biology studies suggest that PLAC8 and SPNS1 regulate the autophagolysosomal compartment and affect the intracellular fate of endocytosed virions.
Insights
Researchers identified two new host factors, SPNS1 and PLAC8, crucial for SARS-CoV-2 entry and COVID-19 pathology. Understanding these interactions aids in developing targeted therapies against the virus.
Area of Science:
- Virology
- Cell Biology
- Genetics
Background:
- Understanding host-pathogen interactions is key to combating SARS-CoV-2 infections and COVID-19.
- Identifying host factors involved in viral entry can reveal potential therapeutic targets.
Purpose of the Study:
- To identify novel host factors involved in SARS-CoV-2 infection using a genome-wide screen.
- To investigate the role of identified factors in viral entry and pathogenesis.
Main Methods:
- Genome-wide CRISPR/Cas9 loss-of-function screen using SARS-CoV-2-pseudotyped lentiviruses.
- Functional experiments with full SARS-CoV-2 viruses.
- Single-cell RNA-Seq, proteomics, and cell biology studies.
Main Results:
- Two novel host factors, SPNS1 and PLAC8, were identified as critical for SARS-CoV-2 entry.
- Loss-of-function of SPNS1 and PLAC8 impairs viral entry.
- PLAC8 is a limiting host factor that enhances viral infection when overexpressed.
- PLAC8 is highly expressed in susceptible respiratory and gut cell types.
- SPNS1 and PLAC8 regulate the autophagolysosomal compartment and virion fate.
Conclusions:
- SPNS1 and PLAC8 are critical host factors for SARS-CoV-2 infection.
- These factors influence viral entry and intracellular trafficking.
- Targeting SPNS1 and PLAC8 may offer new strategies for COVID-19 treatment.
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