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Related Concept Videos

Genetic Variation01:25

Genetic Variation

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Genetic variation is the diversity in DNA sequences found among individuals of the same species. This diversity is crucial for a species' survival because it helps organisms adapt to environmental changes. Genetic variation begins with fertilization, where an egg and sperm cell merge. Each of these cells carries 23 chromosomes, up to 46 in the fertilized egg. Chromosomes are long DNA strands that contain genes, the basic units of heredity.
Genes exist in different versions called alleles,...
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Although Mendel chose seven unrelated traits in peas to study gene segregation, most traits involve multiple gene interactions that create a spectrum of phenotypes. When the interaction of various genes or alleles at different locations influences a phenotype, this is called epistasis. Epistasis often involves one gene masking or interfering with the expression of another (antagonistic epistasis). Epistasis often occurs when different genes are part of the same biochemical pathway. The...
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Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
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In 1928, a German botanist Emil Heitz observed the moss nuclei with a DNA binding dye. He observed that while some chromatin regions decondense and spread out in the interphase nucleus, others do not. He termed them euchromatin and heterochromatin, respectively. He proposed that the heterochromatin regions reflect a functionally inactive state of the genome. It was later confirmed that heterochromatin is transcriptionally repressed, and euchromatin is transcriptionally active chromatin.
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In addition to multiple alleles at the same locus influencing traits, numerous genes or alleles at different locations may interact and influence phenotypes in a phenomenon called epistasis. For example, rabbit fur can be black or brown depending on whether the animal is homozygous dominant or heterozygous at a TYRP1 locus. However, if the rabbit is also homozygous recessive at a locus on the tyrosinase gene (TYR), it will have an unshaded coat that appears white, regardless of its TYRP1...
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Related Experiment Video

Updated: Aug 28, 2025

An Allele-specific Gene Expression Assay to Test the Functional Basis of Genetic Associations
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Variable paralog expression underlies phenotype variation.

Raisa Bailon-Zambrano1, Juliana Sucharov1, Abigail Mumme-Monheit1

  • 1Department of Craniofacial Biology, University of Colorado Anschutz Medical Campus, Aurora, United States.

Elife
|September 22, 2022
PubMed
Summary
This summary is machine-generated.

Zebrafish studies reveal how gene paralog expression variation can buffer craniofacial development, explaining how some individuals overcome genetic mutations. This research offers insights into heritable variation and phenotypic resilience.

Keywords:
compensationcraniofacial developmentdevelopmental biologydevelopmental bufferinggene duplicationgeneticsgenomicsparalogsrobustnesssubfunctionalizationvariabilityvestigial expressionzebrafish

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Area of Science:

  • Developmental Biology
  • Genetics
  • Zebrafish Models

Background:

  • Human facial variation is significant, and craniofacial disorders exacerbate this diversity.
  • Understanding the mechanisms that buffer genetic mutations is crucial for comprehending phenotypic variation.

Purpose of the Study:

  • To investigate the genetic and molecular basis of craniofacial variation in zebrafish mutants.
  • To explore how paralog gene expression influences the severity and variability of craniofacial phenotypes.

Main Methods:

  • Comparative gene expression analysis between selectively bred zebrafish strains (low and high penetrance of mef2ca mutation).
  • Mutagenesis of mef2ca paralogs (mef2aa, mef2b, mef2cb, mef2d) to assess their buffering capacity.
  • Development of a mechanistic model for phenotypic variation based on paralog expression.

Main Results:

  • Selective breeding enriched for differential expression of mef2ca paralogs in strains with varying mutation penetrance.
  • Heritable variation in mef2ca paralog expression correlates with craniofacial phenotype severity and variability.
  • Specific mef2ca paralogs were identified as having modular roles in buffering either the severity or the variability of the mutant phenotype.

Conclusions:

  • Variable, vestigial paralog expression serves as a novel mechanism for buffering developmental processes and phenotypic variation.
  • This study provides a mechanistic model for how genetic resilience to deleterious mutations can arise.
  • Findings advance the understanding of craniofacial development, variation, and the genetic basis of resilience.