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Published on: July 12, 2012
Prenatal lead (Pb) exposure is associated with differential placental DNA methylation and hydroxymethylation in a
Pei Wen Tung1, Elizabeth M Kennedy1, Amber Burt1
1Gangarosa Department of Environmental Health, Emory University, Atlanta, GA, USA.
Insights
Prenatal lead exposure alters placental DNA methylation and hydroxymethylation, impacting pathways crucial for nervous system and organ development. These epigenetic changes highlight potential risks to fetal development from lead exposure.
Area of Science:
- Environmental Epigenetics
- Developmental Toxicology
- Placental Biology
Background:
- Prenatal lead (Pb) exposure is linked to adverse developmental outcomes.
- Epigenetic alterations, including DNA methylation and hydroxymethylation, are observed in animal models and newborn blood.
- The placenta plays a critical role in fetal development, making it a key site for investigating Pb's effects.
Purpose of the Study:
- To investigate the association between prenatal lead exposure and differential DNA methylation and hydroxymethylation in the placenta.
- To identify biological pathways affected by lead-associated epigenetic changes in the placenta.
- To understand how these placental epigenetic modifications may relate to developmental outcomes.
Main Methods:
- Analysis of maternal and infant toenail and placental samples from a US birth cohort (n=167 maternal, n=172 infant, n=115 placenta).
- Quantification of DNA methylation and hydroxymethylation using the Illumina Infinium MethylationEPIC BeadChip.
- Epigenome-wide association study (EWAS) and overrepresentation analysis (ConsensusPathDB) to identify Pb-associated epigenetic sites and affected pathways.
Main Results:
- Prenatal lead exposure was associated with significant differential methylation at 480 sites (maternal toenail), 27 sites (infant toenail), and 2 sites (placenta).
- Differential hydroxymethylation was identified at 2 sites (maternal toenail), 1 site (infant toenail), and 14 sites (placenta), with most showing increased hydroxymethylation.
- Affected pathways included those involved in nervous system development, organ development, calcium transport, and signaling activities.
Conclusions:
- Prenatal lead exposure induces variable DNA methylation and hydroxymethylation in the placenta.
- These epigenetic alterations in the placenta affect critical biological pathways potentially impacting placental function and fetal development.
- The findings underscore the role of placental epigenetics in mediating the adverse effects of prenatal lead exposure.
Abstract:
Prenatal lead (Pb) exposure is associated with adverse developmental outcomes and to epigenetic alterations such as DNA methylation and hydroxymethylation in animal models and in newborn blood. Given the importance of the placenta in foetal development, we sought to examine how prenatal Pb exposure was associated with differential placental DNA methylation and hydroxymethylation and to identify affected biological pathways linked to developmental outcomes. Maternal (n = 167) and infant (n = 172) toenail and placenta (n = 115) samples for prenatal Pb exposure were obtained from participants in a US birth cohort, and methylation and hydroxymethylation data were quantified using the Illumina Infinium MethylationEPIC BeadChip. An epigenome-wide association study was applied to identify differential methylation and hydroxymethylation associated with Pb exposure. Biological functions of the Pb-associated genes were determined by overrepresentation analysis through ConsensusPathDB. Prenatal Pb quantified from maternal toenail, infant toenail, and placenta was associated with 480, 27, and 2 differentially methylated sites (q < 0.05), respectively, with both increases and decreases associated with exposure. Alternatively, we identified 2, 1, and 14 differentially hydroxymethylated site(s) associated with maternal toenail, infant toenail, and placental Pb, respectively, with most showing increases in hydroxymethylation with exposure. Significantly overrepresented pathways amongst genes associated with differential methylation and hydroxymethylation (q < 0.10) included mechanisms pertaining to nervous system and organ development, calcium transport and regulation, and signalling activities. Our results suggest that both methylation and hydroxymethylation in the placenta can be variable based on Pb exposure and that the pathways impacted could affect placental function.
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