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Discovery of JAK2/3 Inhibitors from Quinoxalinone-Containing Compounds
Kamonpan Sanachai1, Panupong Mahalapbutr2, Lueacha Tabtimmai3
1Center of Excellence in Structural and Computational Biology Research Unit, Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand.
Abstract:
Janus kinases (JAKs) are involved in a wide variety of cell signaling associated with T-cell and B-cell mediated diseases. The pathogenesis of common lymphoid-derived diseases and leukemia cancer has been implicated in JAK2 and JAK3. Therefore, to decrease the risk of these diseases, targeting this pathway using JAK2/3 inhibitors could serve as a valuable research tool. Herein, we used a combination of the computational and biological approaches to identify the quinoxalinone-based dual inhibitors of JAK2/3. First, an in-house library of 49 quinoxalinones was screened by molecular docking. Then, the inhibitory activities of 17 screened compounds against both JAKs as well as against two human erythroleukemia cell lines, TF1 and HEL were examined. The obtained results revealed that several quinoxalinones could potentially inhibit JAK2/3, and among them, ST4j showed strong inhibition against JAKs with the IC50 values of 13.00 ± 1.31 nM for JAK2 and 14.86 ± 1.29 nM for JAK3, which are better than ruxolitinib and tofacitinib. In addition, ST4j potentially inhibited TF1 cells (IC50 of 15.53 ± 0.82 μM) and HEL cells (IC50 of 17.90 ± 1.36 μM), similar to both tofacitinib ruxolitinib. Mechanistically, ST4j inhibited JAK2 autophosphorylation and induced cell apoptosis in dose- and time-dependent manners. From molecular dynamics simulations, ST4j was mainly stabilized by van der Waals interactions, and its hydroxyl group could form hydrogen bonds in the hinge region at residues S936 and R938 of JAK2. This research highlights the potential of ST4j to be a novel therapeutic agent for the treatment of lymphoid-derived diseases and leukemia cancer.
Insights
Researchers identified ST4j, a novel quinoxalinone-based dual inhibitor targeting Janus kinases (JAKs), showing potent activity against JAK2/3 and leukemia cell lines. This compound may offer a new therapeutic strategy for lymphoid-derived diseases and leukemia cancer.
Area of Science:
- Medicinal Chemistry
- Pharmacology
- Computational Biology
Background:
- Janus kinases (JAKs) are crucial in cell signaling pathways implicated in T-cell and B-cell mediated diseases.
- Dysregulation of JAK2 and JAK3 is linked to the pathogenesis of lymphoid-derived diseases and leukemia.
- Targeting the JAK pathway with specific inhibitors presents a promising therapeutic strategy.
Purpose of the Study:
- To identify novel quinoxalinone-based dual inhibitors of JAK2 and JAK3 using computational and biological approaches.
- To evaluate the efficacy of identified compounds against human erythroleukemia cell lines.
- To elucidate the mechanism of action for potent inhibitors.
Main Methods:
- In-house library screening of 49 quinoxalinones using molecular docking.
- In vitro evaluation of inhibitory activity against JAK2 and JAK3.
- Assessment of antiproliferative effects on TF1 and HEL human erythroleukemia cell lines.
- Mechanistic studies including JAK2 autophosphorylation inhibition and apoptosis induction.
- Molecular dynamics simulations to understand binding interactions.
Main Results:
- ST4j demonstrated potent dual inhibition of JAK2 (IC50 = 13.00 ± 1.31 nM) and JAK3 (IC50 = 14.86 ± 1.29 nM), outperforming ruxolitinib and tofacitinib.
- ST4j effectively inhibited TF1 (IC50 = 15.53 ± 0.82 μM) and HEL (IC50 = 17.90 ± 1.36 μM) cell proliferation.
- ST4j inhibited JAK2 autophosphorylation and induced apoptosis in a dose- and time-dependent manner.
- Molecular dynamics simulations revealed ST4j stabilization via van der Waals interactions and hydrogen bonding in the JAK2 hinge region.
Conclusions:
- Quinoxalinone derivatives, particularly ST4j, are effective dual inhibitors of JAK2/3.
- ST4j exhibits significant therapeutic potential for treating lymphoid-derived diseases and leukemia cancer.
- Further investigation of ST4j as a novel therapeutic agent is warranted.
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