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Published on: December 23, 2020
Metabolic dyshomeostasis induced by SARS-CoV-2 structural proteins reveals immunological insights into viral
Mercedes Lachén-Montes1,2, Naroa Mendizuri1,2, Karina Ausín2,3
1Clinical Neuroproteomics Unit, Navarrabiomed, Hospital Universitario de Navarra (HUN), Universidad Pública de Navarra (UPNA), Pamplona, Spain.
Abstract:
One of the most common symptoms in COVID-19 is a sudden loss of smell. SARS-CoV-2 has been detected in the olfactory bulb (OB) from animal models and sporadically in COVID-19 patients. To decipher the specific role over the SARS-CoV-2 proteome at olfactory level, we characterized the in-depth molecular imbalance induced by the expression of GFP-tagged SARS-CoV-2 structural proteins (M, N, E, S) on mouse OB cells. Transcriptomic and proteomic trajectories uncovered a widespread metabolic remodeling commonly converging in extracellular matrix organization, lipid metabolism and signaling by receptor tyrosine kinases. The molecular singularities and specific interactome expression modules were also characterized for each viral structural factor. The intracellular molecular imbalance induced by each SARS-CoV-2 structural protein was accompanied by differential activation dynamics in survival and immunological routes in parallel with a differentiated secretion profile of chemokines in OB cells. Machine learning through a proteotranscriptomic data integration uncovered TGF-beta signaling as a confluent activation node by the SARS-CoV-2 structural proteome. Taken together, these data provide important avenues for understanding the multifunctional immunomodulatory properties of SARS-CoV-2 M, N, S and E proteins beyond their intrinsic role in virion formation, deciphering mechanistic clues to the olfactory inflammation observed in COVID-19 patients.
Insights
SARS-CoV-2 structural proteins (M, N, E, S) disrupt olfactory bulb cells, causing metabolic changes and inflammation. This research reveals how these viral proteins contribute to smell loss in COVID-19 patients.
Area of Science:
- Neuroscience
- Virology
- Immunology
Background:
- Sudden loss of smell is a common COVID-19 symptom.
- SARS-CoV-2 has been found in the olfactory bulb (OB), suggesting a direct impact on smell function.
Purpose of the Study:
- To investigate the molecular effects of SARS-CoV-2 structural proteins (M, N, E, S) on mouse OB cells.
- To understand the specific roles of each viral protein in olfactory dysfunction and inflammation.
Main Methods:
- Expressed GFP-tagged SARS-CoV-2 structural proteins in mouse OB cells.
- Performed transcriptomic and proteomic analyses to characterize molecular changes.
- Utilized machine learning for proteotranscriptomic data integration.
Main Results:
- SARS-CoV-2 proteins induced widespread metabolic remodeling, affecting extracellular matrix, lipid metabolism, and tyrosine kinase signaling.
- Each viral protein exhibited unique molecular interactions and affected cell survival and immune responses.
- TGF-beta signaling was identified as a key convergence point activated by the viral proteome.
Conclusions:
- SARS-CoV-2 structural proteins possess immunomodulatory properties beyond virion formation.
- These findings offer mechanistic insights into olfactory inflammation and smell loss associated with COVID-19.
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