Transcriptional regulation of CDKN2A/p16 by sirtuin 7 in senescence
Sergio Rodríguez1, Litzy Gisella Bermúdez1, Daniel González1
1Institute of Human Genetics, School of Medicine, Pontificia Universidad Javeriana, Bogotá 110231, Colombia.
Abstract:
Cell senescence is a state of limited cell proliferation during a stress response or as part of a programmed process. When a senescent cell stops dividing, maintaining metabolic activity contributes to cellular homeostasis maintenance. In this process, the cell cycle is arrested at the G0/G1 phase. p16INK4A protein is a key regulator of this process via its cyclin‑dependent kinase inhibitor (CDKI) function. CDKI 2A (CDKN2A)/p16 gene expression is regulated by DNA methylation and histone acetylation. Sirtuins (SIRTs) are nicotinamide dinucleotide (NAD+)‑dependent deacetylases that have properties which prevent diseases and reverse certain aspects of aging (such as immune, metabolic and cardiovascular diseases). By performing quantitative PCR, Western blot, ChIP, and siRNAs assays, in this study it was demonstrated that CDKN2A/p16 gene transcriptional activation and repression were accompanied by selective deposition and elimination of histone acetylation during the senescence of MRC5 cells. Specifically, significant H3K9Ac and H3K18Ac enrichment in cells with a senescent phenotype concomitant with CDKN2A/p16 gene overexpression was demonstrated compared with the non‑senescent phenotype. Furthermore, the presence of H3K18Ac in deacetyl‑transferase SIRT7 knockdown MRC5 cells allowed CDKN2A/p16 promoter activation. These results suggested that SIRT7 served as a critical component of an epigenetic mechanism involved in senescence mediated by the CDKN2A/p16 gene.
Insights
Cellular senescence involves cell cycle arrest regulated by p16INK4A. This study reveals histone acetylation, particularly H3K18Ac, and SIRT7 are critical epigenetic regulators of p16INK4A gene expression during senescence.
Area of Science:
- Epigenetics
- Cellular Biology
- Molecular Biology
Background:
- Cell senescence is a state of irreversible cell cycle arrest.
- p16INK4A (CDKN2A) is a key regulator of senescence, controlled by epigenetic mechanisms.
- Sirtuins (SIRTs) are NAD+-dependent deacetylases involved in aging and disease.
Purpose of the Study:
- To investigate the role of histone acetylation and SIRT7 in regulating CDKN2A/p16 gene expression during cellular senescence.
- To elucidate the epigenetic mechanisms underlying senescence.
Main Methods:
- Quantitative PCR
- Western blot
- Chromatin immunoprecipitation (ChIP)
- siRNAs assays
- MRC5 cell culture
Main Results:
- Senescence in MRC5 cells correlated with increased H3K9Ac and H3K18Ac enrichment and CDKN2A/p16 overexpression.
- SIRT7 knockdown in senescent cells led to H3K18Ac presence and CDKN2A/p16 promoter activation.
- These findings indicate SIRT7's role in the epigenetic regulation of p16INK4A during senescence.
Conclusions:
- SIRT7 acts as a crucial epigenetic regulator in p16INK4A-mediated cellular senescence.
- Histone acetylation patterns, specifically H3K18Ac, are dynamically regulated during senescence.
- Epigenetic modifications provide a mechanism for controlling cell cycle arrest.
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