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Updated: Aug 27, 2025

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Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq
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Imaging Chromatin Accessibility by Assay of Transposase-Accessible Chromatin with Visualization
1NanoLSI, Cancer Research Institute, Kanazawa University, Kanazawa, Japan. miyanari@staff.kanazawa-u.ac.jp.
Methods in Molecular Biology (Clifton, N.J.)
|September 29, 2022
Abstract:
Chromatin accessibility is one of the fundamental structures regulating genome functions including transcription and DNA repair. Recent technological advantages to analyze chromatin accessibility begun to explore the dynamics of local chromatin structures. Here I describe protocols for Assay of Transposase-Accessible Chromatin with Visualization (ATAC-see), which allows us to analyze subnuclear localization of accessible chromatin and quantify accessible chromatin at single-cell level.

