Related Experiment Video
Updated: Aug 27, 2025

A Quantitative Fitness Analysis Workflow
Published on: August 13, 2012
The structure of genotype-phenotype maps makes fitness landscapes navigable
Sam F Greenbury1,2, Ard A Louis3, Sebastian E Ahnert4,5
1Theory of Condensed Matter Group, Cavendish Laboratory, University of Cambridge, Cambridge, UK. sgreenbury@turing.ac.uk.
Abstract:
Fitness landscapes are often described in terms of 'peaks' and 'valleys', indicating an intuitive low-dimensional landscape of the kind encountered in everyday experience. The space of genotypes, however, is extremely high dimensional, which results in counter-intuitive structural properties of genotype-phenotype maps. Here we show that these properties, such as the presence of pervasive neutral networks, make fitness landscapes navigable. For three biologically realistic genotype-phenotype map models-RNA secondary structure, protein tertiary structure and protein complexes-we find that, even under random fitness assignment, fitness maxima can be reached from almost any other phenotype without passing through fitness valleys. This in turn indicates that true fitness valleys are very rare. By considering evolutionary simulations between pairs of real examples of functional RNA sequences, we show that accessible paths are also likely to be used under evolutionary dynamics. Our findings have broad implications for the prediction of natural evolutionary outcomes and for directed evolution.
More Related Videos
11:36A Protocol for Functional Assessment of Whole-Protein Saturation Mutagenesis Libraries Utilizing High-Throughput Sequencing
Published on: July 3, 2016
14:06Mapping Bacterial Functional Networks and Pathways in Escherichia Coli using Synthetic Genetic Arrays
Published on: November 12, 2012
Related Concept Videos
Epistasis Analysis
Pedigree Analysis
Genetic Lingo
Background and Environment Affect Phenotype
An example of how genetic background affects phenotype can be seen in horses. The Extension gene in horses is responsible for their coat color. A wild-type gene (EE) produces black pigment in the coat, while a mutant gene (ee) produces red pigment. A...
Punnett Squares
Mutation, Gene Flow, and Genetic Drift