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Looking Under the Lamppost: The Search for New Cancer Targets in the Human Kinome
Mireia Sueca-Comes1, Elena Cristina Rusu1, Anna M Grabowska1
1Division of Cancer and Stem Cells, Centre for Cancer Sciences, Biodiscovery Institute, University of Nottingham, Nottingham, United Kingdom (M.S.-C., A.M.G., D.O.B.); Institute of Integrative Systems Biology (I2Sysbio), University of Valencia and Consejo Superior de Investigaciones Científicas, Valencia, Spain (E.C.R.); and SeqPlexing SL, Valencia, Spain (E.C.R.).
Abstract:
The number of cancer drugs is increasing as new chemical entities are developed to target molecules, often protein kinases, driving cancer progression. In 2009, Fedorov et al. identified that of the protein kinases in the human kinome, most of the focus has been on a small subset. They highlighted that many poorly investigated protein kinases were cancer drivers, but there was no relationship between publications and involvement in cancer development or progression. Since 2009, there has been a doubling in the number of publications, patents, and drugs targeting the kinome. To determine whether this was an expansion in knowledge of well-studied targets-searching in the light under the lamppost-or an explosion of investigations into previously poorly investigated targets, we searched the literature for publications on each kinase, updating Federov et al.'s assessment of the druggable kinome. The proportion of papers focusing on the 50 most-studied kinases had not changed, and the makeup of those 50 had barely changed. The majority of new drugs (80%) were against the same group of 50 kinases identified as targets 10 years ago, and the proportion of studies investigating previously poorly investigated kinases (<1%) was unchanged. With three exceptions [p38 mitogenactivated protein kinase (p38a), AMP-activated protein kinase catalytic α-subunit 1,2, and B-Raf proto-oncogene (BRAF) serine/threonine kinase], >95% of publications addressing kinases still focused on a relatively small proportion (<50%) of the human kinome independently of their involvement as cancer drivers. There is, therefore, still extensive scope for discovery of therapeutics targeting different protein kinases in cancer and still a bias toward well-characterized targets over the innovative searchlight into the unknown. SIGNIFICANCE STATEMENT: This study presents evidence that drug discovery efforts in cancer are still to some extent focused on a narrow group of well-studied kinases 10 years after the identification of multiple novel cancer targets in the human kinome. This suggests that there is still room for researchers in academia, industry, and the not-for-profit sector to develop new and diverse therapies targeting kinases for cancer.
Insights
Cancer drug discovery still focuses on a few well-studied protein kinases, not exploring many potential cancer targets. This bias persists despite new drug development, indicating a need for broader kinase research.
Area of Science:
- Biochemistry and Molecular Biology
- Oncology
- Drug Discovery
Background:
- The human kinome comprises numerous protein kinases, many implicated in cancer progression.
- Previous research identified a small subset of kinases as primary targets for cancer drug development.
- Despite increased research and drug development, the focus on specific kinases has remained narrow.
Purpose of the Study:
- To reassess the landscape of protein kinase research and drug development in cancer.
- To determine if recent efforts have expanded investigation into poorly studied kinases or concentrated on known targets.
- To evaluate the bias in cancer kinase-targeted drug discovery.
Main Methods:
- Updated a previous assessment of the druggable human kinome by searching scientific literature.
- Analyzed publication trends and drug development targets related to protein kinases.
- Compared the proportion of research focused on well-studied versus poorly investigated kinases over time.
Main Results:
- The proportion of research on the top 50 most-studied kinases has not changed significantly.
- The majority of new cancer drugs (80%) target the same small group of kinases identified a decade ago.
- Less than 1% of studies investigate previously poorly explored kinases, irrespective of their cancer relevance.
Conclusions:
- Cancer drug discovery remains biased towards a limited number of well-characterized protein kinases.
- There is substantial untapped potential for discovering novel therapeutics targeting diverse kinases in cancer.
- Further research is needed to explore underinvestigated kinases for innovative cancer therapies.
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