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Related Concept Videos

Electrophoresis: Overview01:20

Electrophoresis: Overview

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Electrophoresis is a powerful analytical separation technique that relies on the differential migration of charged species when subjected to an electric field. The core strength of electrophoresis lies in its ability to separate high-molecular-weight species in complex mixtures. It has found widespread use in biochemistry, molecular biology, and analytical chemistry, allowing the separation of compounds like amino acids, nucleotides, carbohydrates, and proteins with excellent resolution.
There...
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Capillary Electrophoresis: Instrumentation01:20

Capillary Electrophoresis: Instrumentation

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Capillary electrophoresis instrumentation typically consists of several key components. A high-voltage power supply generates the electric field necessary for the separation by connecting to an anode (the positively charged electrode) and a cathode (the negatively charged electrode) located in buffer reservoirs at each end of the capillary tube. The system includes a sample vial, a fused silica capillary tube coated with polyimide for mechanical strength through which the sample components...
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DNA Agarose Gel Electrophoresis02:35

DNA Agarose Gel Electrophoresis

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Agarose gel electrophoresis is a laboratory technique commonly used to separate DNA fragments by size. However, it can also be used to isolate and purify DNA fragments using a gel extraction protocol.
Gel extraction follows five major steps: running gel electrophoresis to separate fragments, isolating the individual bands, extracting DNA from those bands, and removing the dye and salts from the extracted mixture to obtain pure DNA.
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Capillary Electrophoresis: Applications01:30

Capillary Electrophoresis: Applications

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Capillary electrophoretic separations offer various modes, each with unique applications. These modes include capillary zone electrophoresis, capillary gel electrophoresis, capillary array electrophoresis, capillary isoelectric focusing, capillary isotachophoresis, micellar electrokinetic chromatography, and capillary electrochromatography.
Capillary zone electrophoresis (CZE) separates ionic components based on their electrophoretic mobility. It has been used to separate proteins, amino acids,...
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Two-dimensional Gel Electrophoresis01:22

Two-dimensional Gel Electrophoresis

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Two-dimensional gel electrophoresis is a high-resolution protein separation method first introduced by O' Farrell and Klose in 1975. This method involves protein separation by two dimensions, mass and charge, making it more accurate than one-dimensional gel electrophoresis.
The first dimension separation uses the isoelectric focusing or IEF technique performed on immobilized pH gradient (IPG) strips that separate proteins according to their isoelectric points.
Biological samples, such...
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DNA Isolation01:24

DNA Isolation

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DNA isolation protocols can be fast and straightforward or complex and time-consuming depending on the type and quality of DNA required for further processing. For example, plasmid DNA extraction is a bit more complicated than genomic DNA extraction because of the need for an appropriate lysis method to separate plasmid DNA from gDNA during isolation. However, for specific applications, such as long-range DNA sequencing that require a good yield of high- quality DNA samples, we need to follow...
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DNA Stable-Isotope Probing DNA-SIP
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Parallelized continuous flow dielectrophoretic separation of DNA.

Jakob Derksen1,2, Martina Viefhues1

  • 1Experimental Biophysics and Applied Nanoscience, Faculty of Physics, Bielefeld University, Bielefeld, Germany.

Electrophoresis
|October 7, 2022
PubMed
Summary
This summary is machine-generated.

This study introduces a novel microfluidic device for high-throughput separation of biological samples using parallelized dielectrophoresis (DEP). The innovative design achieves over 80% purity for nanoparticles and DNA, enabling scalable purification for applications like gene vaccine production.

Keywords:
continuous flowdielectrophoresishigh-throughputpurificationseparation

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Label-free Isolation and Enrichment of Cells Through Contactless Dielectrophoresis
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Separating Beads and Cells in Multi-channel Microfluidic Devices Using Dielectrophoresis and Laminar Flow
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Area of Science:

  • Biotechnology
  • Microfluidics
  • Nanotechnology

Background:

  • Microfluidic devices offer rapid analysis of biological samples such as DNA and proteins.
  • Dielectrophoresis (DEP) is a powerful technique for microfluidic separation, but current devices lack the throughput for large-scale purification.
  • Existing DEP separation methods are insufficient for industrial-scale sample processing due to low sample throughput.

Purpose of the Study:

  • To present a novel microfluidic device featuring parallelized dielectrophoretic separations for enhanced sample throughput.
  • To demonstrate the separation of sub-micron biological samples, including nanoparticles and DNA, using insulator-based DEP.
  • To establish a proof-of-concept for up-scaling dielectrophoretic separation through parallelization.

Main Methods:

  • Development of a microfluidic device with two parallel insulator-based dielectrophoresis (iDEP) separation regions.
  • Utilizing an insulating ridge within each region to create a nanoslit, concentrating dielectrophoretic forces.
  • Employing a cross-injector design for sample introduction and separate reservoirs for collecting purified samples.

Main Results:

  • Successful separation of 100 nm and 40 nm beads, as well as 10 kbp and 5 kbp DNA fragments.
  • Achieved separation purity exceeding 80% for all tested biological samples.
  • Demonstrated the feasibility of parallelization for significantly increasing the throughput of DEP-based separations.

Conclusions:

  • The developed parallelized microfluidic DEP device offers a scalable solution for high-throughput purification of sub-micron biological samples.
  • This label-free technique provides rapid purification, with potential applications in the production of gene vaccines and other biopharmaceuticals.
  • The proof-of-concept validates parallelization as a key strategy for overcoming throughput limitations in dielectrophoretic separations.