Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Translocation of Proteins into the Mitochondria01:19

Translocation of Proteins into the Mitochondria

3.2K
Mitochondrial precursors are translocated to the internal subcompartments via independent mechanisms involving distinct protein machineries called translocases.
Sorting of outer membrane proteins:
Mitochondrial outer membrane proteins are of two types: the transmembrane, beta-barrel porins, and the membrane-anchored, alpha-helical proteins. Beta-barrel porin precursors are translocated by the TOM complex and inserted into the outer mitochondrial membrane by the SAM complex. In contrast,...
3.2K
Delivery Pathways to the Lysosome01:36

Delivery Pathways to the Lysosome

6.7K
Eukaryotic cells use different mechanisms to eliminate toxic waste obsolete and worn-out substances. Lysosomes play a pivotal role in this, and hence, these substances are carried to the lysosome from other parts of the cell and extracellular space through different pathways. The most elaborately studied pathways to the lysosome are the endocytic pathways.
Endocytosis
In endocytosis, the cell membrane takes up macromolecules and particles from the surrounding medium. Clathrin-mediated...
6.7K
Regulation of Nuclear Protein Sorting01:45

Regulation of Nuclear Protein Sorting

2.4K
Nuclear protein sorting regulates nucleus composition and gene expression, crucial for determining the fate of a eukaryotic cell. Hence, the entry and exit of molecules across the nuclear envelope is a tightly controlled process. Nuclear protein sorting can be inhibited by one of the following ways: 1) masking cargo signal sequences, 2) modifying the nuclear receptor's affinity for cargo, 3) controlling the nuclear pore size, 4) retaining the cargo during its transit to the cytosol or the...
2.4K
Autophagy01:27

Autophagy

4.5K
Autophagy is a self-digesting process by which a cell protects itself from threats both within and outside the cell, ranging from abnormal proteins to invading bacteria. In this process, obsolete components of the cell and invading microbes are degraded by hydrolytic enzymes active in an acidic environment of the lysosomal lumen.
An autophagic pathway consists of a series of signaling events activated in response to diverse stress and physiological conditions such as food deprivation,...
4.5K
Regulation of the Unfolded Protein Response01:31

Regulation of the Unfolded Protein Response

2.5K
Inositol-requiring kinase one or IRE1 is the most conserved eukaryotic unfolded protein response (UPR) receptor. It is a type I transmembrane protein kinase receptor with a distinctive site-specific RNase activity. As the binding mechanics of the misfolded proteins with the N-terminal domain of IRE-1 are unclear, three binding models — direct, indirect, and allosteric -- are proposed for receptor activation. Nevertheless, it is known that once a misfolded protein associates with IRE1, it...
2.5K
Export of Misfolded Proteins out of the ER01:32

Export of Misfolded Proteins out of the ER

3.8K
After folding, the ER assesses the quality of secretory and membrane proteins. The correctly folded proteins are cleared by the calnexin cycle for transport to their final destination, while misfolded proteins are held back in the ER lumen. The ER chaperones attempt to unfold and refold the misfolded proteins but sometimes fail to achieve the correct native conformation. Such terminally misfolded proteins are then exported to the cytosol by ER-associated degradation or ERAD pathway for...
3.8K

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Activation of AMPK as a therapeutic strategy for FBXL4-related mitochondrial DNA depletion syndrome.

EMBO molecular medicine·2026
Same author

The 'mitochondrial guardian' α-amyrin links colourful fruit consumption to cognitive resilience.

Autophagy·2026
Same author

Chaperone-mediated autophagy: the Achilles heel of the retinal pigment epithelium during age-related macular degeneration.

Autophagy·2026
Same author

The Mitochondrial Guardian α-Amyrin Mitigates Alzheimer's Disease Pathology via Modulation of the DLK-SARM1-ULK1 Axis.

Advanced science (Weinheim, Baden-Wurttemberg, Germany)·2026
Same author

Author Correction: Autophagy repression by antigen and cytokines shapes mitochondrial, migration and effector machinery in CD8 T cells.

Nature immunology·2026
Same author

FIP200 regulates plasma B cell differentiation via mitochondrial and heme homeostasis.

The Journal of experimental medicine·2025

Related Experiment Video

Updated: Aug 26, 2025

Monitoring Stub1-Mediated Pexophagy
08:26

Monitoring Stub1-Mediated Pexophagy

Published on: May 12, 2023

1.7K

BNIP3L/NIX regulates both mitophagy and pexophagy.

Léa P Wilhelm1, Juan Zapata-Muñoz2, Beatriz Villarejo-Zori2

  • 1MRC Protein Phosphorylation and Ubiquitylation Unit, University of Dundee, Dundee, UK.

The EMBO Journal
|October 10, 2022
PubMed
Summary

The protein BNIP3L/NIX coordinates the breakdown of both mitochondria (mitophagy) and peroxisomes (pexophagy) via selective autophagy. This dual role highlights the interconnectedness of these essential cellular recycling pathways.

Keywords:
autophagymitochondriamitophagyperoxisomespexophagy

More Related Videos

In Vitro and In Vivo Detection of Mitophagy in Human Cells, C. Elegans, and Mice
08:40

In Vitro and In Vivo Detection of Mitophagy in Human Cells, C. Elegans, and Mice

Published on: November 22, 2017

17.7K
Visualizing Mitophagy with Fluorescent Dyes for Mitochondria and Lysosome
07:56

Visualizing Mitophagy with Fluorescent Dyes for Mitochondria and Lysosome

Published on: November 30, 2022

4.7K

Related Experiment Videos

Last Updated: Aug 26, 2025

Monitoring Stub1-Mediated Pexophagy
08:26

Monitoring Stub1-Mediated Pexophagy

Published on: May 12, 2023

1.7K
In Vitro and In Vivo Detection of Mitophagy in Human Cells, C. Elegans, and Mice
08:40

In Vitro and In Vivo Detection of Mitophagy in Human Cells, C. Elegans, and Mice

Published on: November 22, 2017

17.7K
Visualizing Mitophagy with Fluorescent Dyes for Mitochondria and Lysosome
07:56

Visualizing Mitophagy with Fluorescent Dyes for Mitochondria and Lysosome

Published on: November 30, 2022

4.7K

Area of Science:

  • Cell Biology
  • Molecular Biology
  • Autophagy Research

Background:

  • Mitochondria and peroxisomes are metabolically related organelles with crucial cellular functions.
  • Both organelles can be degraded via selective autophagy, known as mitophagy and pexophagy, respectively.
  • The coordination and conditions triggering simultaneous mitophagy and pexophagy remain largely unknown.

Purpose of the Study:

  • To investigate if mitophagy and pexophagy are activated under similar conditions.
  • To elucidate the molecular mechanisms coordinating these selective autophagy pathways.
  • To determine the role of BNIP3L/NIX in pexophagy.

Main Methods:

  • Utilized iron chelation to induce selective autophagy.
  • Investigated the role of BNIP3L/NIX in mitophagy and pexophagy.
  • Examined mouse tissue lacking NIX for peroxisomal content.
  • Observed mitophagy and pexophagy during cardiomyocyte and erythrocyte differentiation.

Main Results:

  • Multiple selective autophagy pathways, including mitophagy and pexophagy, are activated by iron chelation.
  • BNIP3L/NIX, a known mitophagy receptor, was found to localize to peroxisomes and drive pexophagy.
  • Mice lacking NIX exhibited increased peroxisomal content, confirming NIX's role in pexophagy in vivo.
  • Pexophagy is upregulated under the same physiological conditions that induce mitophagy.

Conclusions:

  • BNIP3L/NIX plays a dual role, mediating both mitophagy and pexophagy.
  • This discovery reveals a molecular link between mitochondrial and peroxisomal turnover.
  • The findings illustrate the interconnectedness of selective autophagy pathways in cellular homeostasis.