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Identification of candidate biomarkers for severe adenovirus community-acquired pneumonia by proteomic approach
Tingting Shi1, Jun Bai2, Diyuan Yang1
1Department of Respiratory, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou, China.
Insights
Leucine aminopeptidase III (LAP3) is a potential biomarker for assessing severe pediatric community-acquired pneumonia (CAP) caused by Human adenoviruses (ADV). This finding aids in early diagnosis and intervention for severe ADV CAP.
Area of Science:
- Biochemistry
- Pediatrics
- Infectious Diseases
Background:
- Human adenoviruses (ADV) are a significant cause of childhood mortality globally.
- Current methods for assessing the severity of ADV-associated Community-Acquired Pneumonia (CAP) rely on clinical features, lacking rapid and accurate diagnostic biomarkers.
- Early intervention is crucial for managing severe pediatric ADV CAP.
Purpose of the Study:
- To screen for candidate biomarkers for severe pediatric ADV CAP.
- To identify differentially expressed proteins associated with ADV CAP severity.
- To evaluate the potential of identified proteins as diagnostic markers for early intervention.
Main Methods:
- Serum samples from healthy children, and patients with ADV CAP, Streptococcus pneumoniae (SP) CAP, and Respiratory Syncytial Virus (RSV) CAP were analyzed.
- iTRAQ-based mass spectrometry was used to identify differentially expressed proteins (DEPs).
- Gene Ontology, Pathway Enrichment analysis, and protein-protein interaction networks were constructed to analyze DEPs.
Main Results:
- 119 DEPs in mild ADV CAP and 148 DEPs in severe ADV CAP were identified compared to healthy controls.
- Four proteins (S100A9, S100A8, Leucine aminopeptidase III (LAP3), and Apolipoprotein A-IV (APOA4)) were validated by Western blot.
- LAP3 was significantly upregulated in severe ADV CAP compared to mild ADV CAP, SP CAP, and RSV CAP, indicating its potential as a severity marker.
Conclusions:
- Leucine aminopeptidase III (LAP3) protein is identified as a potential diagnostic biomarker for assessing the severity of ADV CAP in children.
- This discovery may facilitate earlier clinical intervention for severe pediatric ADV CAP.
- LAP3 shows promise in differentiating ADV CAP severity and in comparison to other common pediatric respiratory infections.
Introduction:
Worldwide, Human adenoviruses (ADV) cause a significant portion of childhood mortality. The severity of ADV Community-acquired Pneumonia (CAP) can be assessed by clinical features, but the rapid and accurate diagnostic biomarkers are still lacking. Candidate biomarkers for severe ADV CAP are to be screened and the different protein expression levels associated with pediatric ADV CAP may help assess the severity of ADV CAP for the pediatricians to make early intervention.
Methods:
In our study, serum samples from healthy controls, patients with ADV CAP, streptococcus pneumonia (SP) and respiratory syncytial virus (RSV) infection were collected. Differently expressed proteins (DEPs) were detected by iTRAQ-based mass spectrometry. Gene Ontology and Pathway Enrichment analysis of DEPs were performed by Cytoscape. The protein interaction network for the identified proteins was constructed by String.
Results:
The results showed that 119 DEPs in mild ADV CAP and 148 DEPs in severe ADV CAP were identified, compared with healthy children. Four proteins (Protein S100-A9 (S100A9), Protein S100-A8 (S100A8), Leucine aminopeptidase III (LAP3), and Apolipoprotein A-IV(APOA4)) were validated by Western blot, and results indicated that the expression levels of these four proteins were consistent with the proteomic analysis. LAP3 was the most significantly up-regulated protein in severe ADV CAP compared to mild group. In addition, LAP3 was the most significantly up-regulated protein in severe ADV CAP comparing with SP CAP infection and RSV CAP infection.
Conclusion:
Our findings identified LAP3 protein as a potential diagnostic biomarker which can assess the severity of ADV CAP.
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