Comprehensive pan-cancer analysis identifies cellular senescence as a new therapeutic target for cancer: multi-omics

Qiuhuan Zhang1, Yi Tang2, Guimei Hu3

  • 1Department of Colorectal and Anal Surgery, The People's Hospital of Guangxi Zhuang Autonomous Region & Guangxi Academy of Medical Sciences Guangxi, China.

Insights

Cellular senescence, once seen as anti-tumor, can promote cancer. This study reveals its complex role in tumor immunity, impacting prognosis and treatment across 33 cancer types.

Area of Science:

  • Oncology
  • Immunology
  • Molecular Biology

Background:

  • Cellular senescence is recognized as an anti-tumor mechanism.
  • Emerging evidence indicates senescent cells can promote tumor growth and metastasis.
  • The precise role of senescence in tumor immunity requires further investigation.

Purpose of the Study:

  • To analyze genomic alterations and drug sensitivity of senescence-related genes in 33 tumor types.
  • To investigate the correlation between cellular senescence score and tumor immune microenvironment (TIME), prognosis, and immune gene expression.
  • To assess senescence activation in the tumor microenvironment (TME) using single-cell sequencing.

Main Methods:

  • Analysis of gene expression, copy number variation, single-nucleotide variation, and methylation in senescence-related genes.
  • Calculation of cellular senescence score via single-sample gene-set enrichment analysis.
  • Comprehensive analysis of correlations with prognosis, TIME, and immune gene expression; single-cell RNA sequencing for TME assessment.

Main Results:

  • Significant variation in senescence-associated hub gene expression across cancer types; missense mutations and copy number variations were common.
  • Tumors with higher cellular senescence scores generally showed poorer prognosis and correlated with immune checkpoint molecules (NRP1, CD276, CD44).
  • Senescence pathways showed sensitivity to drugs like methotrexate; elevated monocyte senescence was observed in kidney renal clear cell carcinoma TME.

Conclusions:

  • Cellular senescence plays a significant, multifaceted role in the tumor immune microenvironment across various human cancers.
  • Findings provide crucial insights into the impact of senescence on cancer progression and the efficacy of immunotherapy.
  • Senescence modulation represents a potential therapeutic strategy in oncology.

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