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Published on: August 28, 2019
Multiple machine learning algorithms assisted QSPR models for aqueous solubility: Comprehensive assessment with
Tengyi Zhu1, Ying Chen1, Cuicui Tao1
1School of Environmental Science and Engineering, Yangzhou University, Yangzhou 225127, Jiangsu, China.
A new CRITIC-TOPSIS method comprehensively assesses quantitative structure-property relationship (QSPR) models for predicting organic chemical aqueous solubility. The XGBoost model demonstrated superior predictive accuracy, offering a reliable tool for environmental risk assessment.
Area of Science:
- Environmental Chemistry
- Computational Chemistry
- Machine Learning in Environmental Science
Background:
- Aqueous solubility is a critical environmental property for assessing hydrophobicity, ecological risk, and toxicity of organic pollutants.
- Quantitative Structure-Property Relationship (QSPR) models are used to predict aqueous solubility, but lack standardized evaluation procedures.
- Existing QSPR models face challenges in comprehensive assessment, hindering the selection of optimal predictive tools.
Purpose of the Study:
- To propose and validate the CRITIC-TOPSIS comprehensive assessment method for environmental QSPR models.
- To evaluate the predictive performance of various machine learning (ML) algorithms for aqueous solubility prediction.
- To identify the most accurate and externally competitive QSPR models for predicting aqueous solubility (log Kws).
Main Methods:
- Development of 39 QSPR models using 13 ML algorithms across 4 algorithm families and 3 descriptor screening methods.
- Application of the CRITIC-TOPSIS comprehensive assessment method, integrating multiple statistical parameters.
- Evaluation of model predictive accuracy and external competitiveness.
Main Results:
- The CRITIC-TOPSIS method was successfully applied to comprehensively evaluate QSPR models for aqueous solubility.
- MLR-1, XGB-1, DNN-1, and kNN-1 models showed superior predictive accuracy within their respective algorithm tribes.
- The XGBoost model combined with the SRM descriptor screening method (XGB-1, C = 0.599) emerged as the optimal model for predicting aqueous solubility.
Conclusions:
- The proposed CRITIC-TOPSIS approach provides a robust framework for evaluating environmental property prediction models.
- The optimized XGBoost model offers a reliable and accurate method for predicting the aqueous solubility of organic chemicals.
- This comprehensive evaluation strategy can guide the selection of superior QSPR models in environmental research.
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