Machine learning models for identifying predictors of clinical outcomes with first-line immune checkpoint inhibitor

Ying Li1, Matthew Brendel2, Ning Wu3

  • 1Regeneron Pharmaceuticals, Inc., 777 Old Saw Mill River Road, Tarrytown, NY, 10591, USA. ying.li1@regeneron.com.

Scientific Reports
|October 21, 2022
PubMed

Insights

Machine learning models predict outcomes for advanced non-small cell lung cancer patients receiving first-line immune checkpoint inhibitors. Key predictors like performance status and PD-L1 levels were identified, aiding in understanding treatment response variations.

Area of Science:

  • Oncology
  • Machine Learning
  • Real-World Evidence

Background:

  • Immune checkpoint inhibitors (ICIs) are standard first-line therapy for advanced non-small cell lung cancer (aNSCLC) lacking driver mutations.
  • Observed outcome variations in clinical trials suggest a need for better prediction models in real-world practice.

Purpose of the Study:

  • To develop and validate machine learning (ML)-based survival models for predicting outcomes in aNSCLC patients receiving first-line ICI therapy.
  • To identify key predictors of overall survival (OS) and progression-free survival (PFS) in this patient population.

Main Methods:

  • Applied ML survival models to a real-world cohort of aNSCLC patients from a US electronic health record database.
  • Evaluated model performance using concordance index (c-index) and employed explainability techniques to identify significant predictors.
  • Analyzed Kaplan-Meier survival curves to compare outcomes between identified risk groups.

Main Results:

  • The ML model achieved c-indices of 0.672 for OS and 0.612 for PFS.
  • Significant differences in OS and PFS were observed between low- and high-risk groups (log-rank test p < 0.0001).
  • Top predictors for both OS and PFS included Eastern Cooperative Oncology Group performance status, PD-L1 expression, and serum albumin.

Conclusions:

  • ML-based survival models can effectively predict outcomes in real-world aNSCLC patients treated with first-line ICIs.
  • Identified predictors align with clinical expectations and can help understand treatment response heterogeneity.
  • Further validation on independent datasets is necessary to confirm these findings.

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