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Updated: Aug 24, 2025

Identification of Circular RNAs using RNA Sequencing
Published on: November 14, 2019
The expression profiles of circular RNAs and competing endogenous RNA networks in intrahepatic cholangiocarcinoma
Zi Liang1,2, Liyan Liu3, Xinyi Guo1
1Department of Oncology, The Second Affiliated Hospital of Soochow University, Suzhou, China.
Abstract:
Introduction: Intrahepatic cholangiocarcinoma (iCCA) is a heterogeneous entity with diverse etiologies, morphologies, and clinical outcomes, but our knowledge of its epidemiology and carcinogenesis is very limited. Materials and methods: The expression patterns of circRNAs were explored in iCCA tissues and corresponding adjacent normal ones, denoted by (iCCA) and (iCCAP), respectively, using high-throughput sequencing. Results: A total of 117 differential expressed (DE) circRNAs were identified. Based on the parental transcripts of circRNAs, these DE circRNAs were related to several important GO terms and were enriched in important pathways. Two circRNA-mediated ceRNA networks were constructed and many important metabolic pathways related to mRNAs were regulated by DE circRNAs via miRNAs. Conclusion: Our study revealed the DE circRNAs in the iCCA tissues compared with iCCAP ones, suggesting that circRNAs may play crucial roles in the pathogenesis of iCCA.

