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Updated: Aug 24, 2025

From a Natural Product to Its Biosynthetic Gene Cluster: A Demonstration Using Polyketomycin from Streptomyces diastatochromogenes Tü6028
Published on: January 13, 2017
Structure, function, and engineering of plant polyketide synthases
Takahiro Mori1, Yu Nakashima2, Hiroyuki Morita2
1Graduate School of Pharmaceutical Sciences, The University of Tokyo, Tokyo, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Tokyo, Japan; PRESTO, Japan Science and Technology Agency, Saitama, Japan.
Type III polyketide synthases (PKSs) are versatile enzymes. Understanding their structure and function enables engineering novel polyketides with unique biological activities.
Area of Science:
- Biochemistry and Molecular Biology
- Enzymology
- Natural Product Synthesis
Background:
- Type III polyketide synthases (PKSs) are crucial enzymes that synthesize diverse polyketide scaffolds.
- These enzymes share conserved structural features, including a thiolase fold and a catalytic triad.
- Functional diversity arises from subtle variations in active site architecture.
Purpose of the Study:
- To detail methods for identifying, characterizing, and engineering Type III PKSs.
- To provide an overview of the structures and functions of these enzymes.
- To highlight the potential for structure-guided enzyme engineering.
Main Methods:
- Biochemical characterization of Type III PKSs.
- Structural analysis of enzyme active sites.
- Structure-guided enzyme engineering approaches.
Main Results:
- Subtle active site differences dictate functional diversity in highly homologous Type III PKSs.
- Detailed understanding of catalytic mechanisms and versatility.
- Established platform for generating novel polyketides through enzyme engineering.
Conclusions:
- Knowledge of Type III PKS structure-function relationships facilitates enzyme engineering.
- Structure-guided approaches enable the creation of unnatural polyketides.
- Type III PKSs represent valuable targets for synthetic biology and drug discovery.
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