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Updated: Aug 24, 2025

Oncogenic Gene Fusion Detection Using Anchored Multiplex Polymerase Chain Reaction Followed by Next Generation Sequencing
Published on: July 5, 2019
[NTRK Gene Fusions and Treatment in NTRK Fusion-Positive Solid Cancers]
1Dept. of Medical Oncology, National Cancer Center Hospital East.
Abstract:
Neurotrophic tyrosine receptor kinase(NTRK)gene variants have been reported in a variety of cancer types. The prevalence of NTRK gene variants is less than 1% in many types of solid cancer. The highest NTRK gene fusions frequencies were found in secretary breast carcinoma and infantile fibrosarcoma. There are several methods to detect NTRK gene variants, including RT-PCR, and comprehensive genome profiling. Two NTRK inhibitors, entrectinib and larotrectinib, are approved for NTRK gene fusion positive solid cancers in Japan. NTRK inhibitors provide a durable response, but duration of response may be limited by acquired resistance. A next-generation TRK inhibitors are expected to overcome acquired resistance.
Insights
Neurotrophic tyrosine receptor kinase (NTRK) gene fusions are rare in most cancers but drive specific tumor types. Approved NTRK inhibitors offer durable responses, with next-generation drugs aiming to overcome resistance.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Context:
- Neurotrophic tyrosine receptor kinase (NTRK) gene variants are identified across diverse solid tumors.
- While generally rare (<1%), NTRK gene fusions show higher prevalence in specific cancers like secretory breast carcinoma and infantile fibrosarcoma.
- Detection methods include RT-PCR and comprehensive genomic profiling.
Purpose:
- To review the landscape of NTRK gene variants in solid tumors.
- To discuss current NTRK inhibitors and their limitations.
- To highlight the need for next-generation inhibitors.
Summary:
- NTRK gene fusions, though infrequent overall, are significant drivers in certain rare cancers.
- Entrectinib and larotrectinib are approved NTRK inhibitors demonstrating efficacy in NTRK fusion-positive solid tumors.
- Acquired resistance can limit the duration of response to current therapies.
Impact:
- NTRK inhibitors represent a targeted therapy approach for specific cancer subsets.
- Understanding NTRK fusion prevalence and resistance mechanisms is crucial for optimizing treatment strategies.
- Development of next-generation TRK inhibitors holds promise for overcoming acquired resistance and improving patient outcomes.
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