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RNA Pull-down Procedure to Identify RNA Targets of a Long Non-coding RNA
Published on: April 10, 2018
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A long noncoding RNA HILinc1 enhances pear thermotolerance by stabilizing PbHILT1 transcripts through complementary
Yi Zhang1, Shengnan Wang1, Wei Li1
1Collage of Horticulture, China Agricultural University, 100193, Beijing, China.
Communications Biology
|October 26, 2022
Summary
Global warming causes heat stress in crops. This study identifies Heat-induced long intergenic noncoding RNA 1 (HILinc1) as crucial for enhancing pear thermotolerance by stabilizing its target transcript.
Area of Science:
- Plant Biology
- Molecular Biology
- Genetics
Background:
- Global warming intensifies, leading to increased heat stress impacting crop production and quality.
- Thermotolerance is a critical trait for crop survival and yield under adverse environmental conditions.
Purpose of the Study:
- To characterize the role of Heat-induced long intergenic noncoding RNA 1 (HILinc1) in regulating thermotolerance in pear (Pyrus spp.).
- To elucidate the molecular mechanism by which HILinc1 enhances heat response in pear plants.
Main Methods:
- Identification and characterization of HILinc1 and its target transcript, PbHILT1.
- Analysis of the interaction between PbHILT1 and Heat shock transcription factor A1b (PbHSFA1b).
- Gene expression analysis and functional validation through transient overexpression and silencing experiments in pear.
Main Results:
- HILinc1, a cytoplasm-enriched lincRNA, was found to stabilize its target transcript, PbHILT1, thereby upregulating its expression.
- PbHILT1 binds to PbHSFA1b, enhancing its transcriptional activity and leading to the upregulation of Multiprotein bridging factor 1c (PbMBF1c).
- Overexpression of HILinc1 or PbHILT1 enhanced pear thermotolerance, while silencing decreased it.
Conclusions:
- HILinc1 plays a key role in enhancing pear thermotolerance.
- A novel regulatory pathway involving HILinc1, PbHILT1, PbHSFA1b, and PbMBF1c is identified for heat stress response in pear.
- This mechanism enhances thermotolerance through stabilization of PbHILT1 transcripts, offering potential targets for crop improvement.
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