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Guidelines and Experience Using Imaging Biomarker Explorer IBEX for Radiomics
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Wasserstein-based texture analysis in radiomic studies.

Zehor Belkhatir1, Raúl San José Estépar2, Allen R Tannenbaum3

  • 1School of Engineering and Sustainable Development, De Montfort University, Leicester, United Kingdom.

Computerized Medical Imaging and Graphics : the Official Journal of the Computerized Medical Imaging Society
|October 29, 2022
PubMed
Summary
This summary is machine-generated.

This study introduces a novel radiomics pipeline using spatial texture features and the Wasserstein metric for improved COVID-19 classification from CT scans. The method enhances diagnostic accuracy by preserving spatial information lost in traditional texture analysis.

Keywords:
Bayesian optimizationOptimal mass transportRadiomics textureReference samplesSpatial texture featuresSupervised classificationWasserstein metric

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Area of Science:

  • Radiomics and Medical Image Analysis
  • Computational Pathology
  • Machine Learning in Healthcare

Background:

  • Radiomics extracts quantitative features from medical images, but traditional methods often lose spatial information from texture matrices like GLCMs.
  • Existing texture features in radiomics can be redundant and fail to capture the full spatial context within images.
  • Accurate classification of diseases like COVID-19 from CT scans is crucial for timely diagnosis and treatment.

Purpose of the Study:

  • To propose a novel radiomics pipeline that preserves spatial information in texture features for improved image classification.
  • To introduce new spatial texture features using the Wasserstein metric to quantify similarity within image classes.
  • To evaluate the pipeline's effectiveness in diagnosing COVID-19 using CT images.

Main Methods:

  • Developed a pipeline incorporating novel spatial texture features derived from Gray-Level Co-occurrence Matrices (GLCMs).
  • Utilized the Wasserstein metric from optimal mass transport theory to measure spatial similarity between texture matrices.
  • Employed a Support Vector Machine (SVM) classifier with Bayesian optimization for selecting optimal texture references and classification.

Main Results:

  • The proposed pipeline, using optimized spatial texture features with the Wasserstein metric, demonstrated high potential in classifying unseen COVID-19 CT images.
  • Compared to traditional statistical features and Euclidean-based methods, the Wasserstein-based spatial features showed superior performance.
  • The method effectively captures and leverages spatial information inherent in texture matrices for enhanced classification accuracy.

Conclusions:

  • The novel radiomics pipeline offers a promising approach for disease classification by preserving and utilizing spatial texture information.
  • The Wasserstein metric provides a robust way to quantify spatial similarity for feature extraction in radiomics.
  • The developed method and available code can be adapted for various classification tasks in medical imaging beyond COVID-19 detection.