Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Keystone Species01:39

Keystone Species

22.0K
Measures of species biodiversity, such as richness (i.e., the number of species present) and evenness (i.e., their relative abundance), describe an ecological community’s structure. Many factors affect community structure, including abiotic factors (e.g., sunlight and nutrients), disturbances (e.g., fire or flood), species interactions (e.g., predation or competition), and chance events (e.g., foreign species invasion). Certain species—such as keystone species—also play a...
22.0K
Ecological Disturbance02:26

Ecological Disturbance

17.4K
An ecological disturbance is a temporary disruption in the environment resulting from abiotic, biotic, or anthropogenic factors, causing a pronounced change in an ecosystem. The impact of an ecological disturbance, which can depend on its intensity, frequency, and spatial distribution, plays a significant role in shaping the species diversity within the ecosystem.
17.4K
Speciation Rates01:07

Speciation Rates

21.3K
Overview
21.3K
Ecological Succession02:17

Ecological Succession

17.6K
Ecological succession is influenced by the processes of facilitation, inhibition, and toleration. Facilitation occurs when early successional species create more favorable ecological conditions for subsequent species, such as enhanced nutrient, water, or light availability. In contrast, inhibition happens when early successional species create unfavorable ecological conditions for potential successive species, such as limiting resource availability. In some cases, later successional species...
17.6K
Types of Selection01:46

Types of Selection

41.3K
Natural selection influences the frequencies of particular alleles and phenotypes within populations in several different ways. Primarily, natural selection can be directional, stabilizing, or disruptive. Directional selection favors one extreme trait and shifts the population towards that phenotype while selecting against individuals displaying alternate traits. Stabilizing selection favors an intermediate trait with a narrow range of variation. Deviation from the optimal phenotype towards an...
41.3K
Stringent Response in E. coli01:23

Stringent Response in E. coli

40
Bacterial growth is closely tied to nutrient availability, with cells proliferating exponentially under favorable conditions and entering a stationary phase when resources become scarce. This transition is mediated by a regulatory mechanism known as the stringent response, which allows bacteria to adapt to nutrient deprivation by modulating gene expression and metabolic activity.During nutrient scarcity, intracellular amino acid levels decline. It results in the accumulation of uncharged tRNAs...
40

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Energetic constraints shape the diversity of feasible ecological networks.

PLoS computational biology·2026
Same author

Analysis of the impact of gene evolution on reproductive effects reveals prevalent sexual and germline-soma conflicts.

Nature ecology & evolution·2026
Same author

Warming and Species Richness Weaken Eco-Phenotypic Feedback Loop in Long-Term Natural Ecosystems.

Ecology letters·2026
Same author

Global stability of ecological and evolutionary dynamics via equivalence.

Proceedings of the National Academy of Sciences of the United States of America·2026
Same author

Best practices for moving from correlation to causation in ecological research.

Nature communications·2026
Same author

Robust coexistence in competitive ecological communities.

Nature communications·2026

Related Experiment Video

Updated: Aug 23, 2025

Experimental Protocol for Manipulating Plant-induced Soil Heterogeneity
08:16

Experimental Protocol for Manipulating Plant-induced Soil Heterogeneity

Published on: March 13, 2014

19.0K

Ranking species based on sensitivity to perturbations under non-equilibrium community dynamics.

Lucas P Medeiros1,2, Stefano Allesina3,4, Vasilis Dakos5

  • 1Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Massachusetts, Cambridge, USA.

Ecology Letters
|November 1, 2022
PubMed
Summary
This summary is machine-generated.

Ecological management needs rapid detection of sensitive species. New data-driven methods rank species sensitivity over time, revealing that sensitive species are harder to forecast and differ from typical monitoring criteria.

Keywords:
Jacobian matrixeigenvectorforecastingpopulation dynamicsspecies interactionstime series

More Related Videos

Modeling the Size Spectrum for Macroinvertebrates and Fishes in Stream Ecosystems
07:41

Modeling the Size Spectrum for Macroinvertebrates and Fishes in Stream Ecosystems

Published on: July 30, 2019

7.5K
Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response
06:26

Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response

Published on: May 23, 2020

8.3K

Related Experiment Videos

Last Updated: Aug 23, 2025

Experimental Protocol for Manipulating Plant-induced Soil Heterogeneity
08:16

Experimental Protocol for Manipulating Plant-induced Soil Heterogeneity

Published on: March 13, 2014

19.0K
Modeling the Size Spectrum for Macroinvertebrates and Fishes in Stream Ecosystems
07:41

Modeling the Size Spectrum for Macroinvertebrates and Fishes in Stream Ecosystems

Published on: July 30, 2019

7.5K
Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response
06:26

Time-lapse Imaging of Bacterial Swarms and the Collective Stress Response

Published on: May 23, 2020

8.3K

Area of Science:

  • Ecology and ecological modeling
  • Community dynamics
  • Time-series analysis in ecology

Background:

  • Effective ecological management necessitates rapid identification of species vulnerable to environmental changes.
  • Traditional approaches focusing on equilibrium recovery limit understanding of species responses during fluctuating abundances.
  • Current population monitoring often relies on abundance or rate of change, potentially missing key sensitive species.

Purpose of the Study:

  • To introduce novel data-driven methods for ranking species sensitivity to perturbations using time-varying ecological data.
  • To assess the utility of these methods in predicting species sensitivity order from time-series data.
  • To identify characteristics of sensitive species beyond traditional monitoring metrics.

Main Methods:

  • Development of two data-driven approaches: expected sensitivity and eigenvector rankings.
  • Utilizing the time-varying Jacobian matrix to derive species sensitivity metrics.
  • Application of methods to synthetic population dynamics models and two empirical time-series datasets.

Main Results:

  • The proposed methods successfully infer and rank species sensitivities from time-series data.
  • Species identified as most sensitive do not consistently exhibit the most rapid abundance changes or lowest population sizes.
  • Sensitive species were found to be more challenging to forecast in empirical datasets.

Conclusions:

  • Novel methods provide a more accurate way to identify species sensitivity in ecological communities.
  • Rethinking species monitoring criteria beyond abundance and fluctuation is crucial for effective management.
  • Integrating species interaction data through these new approaches can enhance the management of ecological communities, particularly those in non-equilibrium states.