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CRISPR/Cas9-based coronal nanostructures for targeted mitochondria single molecule imaging.

Xuan Zhao1, Na Na1, Jin Ouyang1

  • 1Key Laboratory of Theoretical and Computational Photochemistry, College of Chemistry, Beijing Normal University Beijing 100875 China jinoyang@bnu.edu.cn.

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This study introduces a novel DNA nanoprobe (PDNC) for precise mitochondrial RNA detection in living cells. This method enhances probe delivery and enables sensitive imaging for disease diagnosis and subcellular research.

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Area of Science:

  • Molecular Biology
  • Cell Biology
  • Biotechnology

Background:

  • Subcellular biological states, particularly mitochondrial function, are critical in disease pathogenesis.
  • Current nanoprobes for mitochondrial RNAs (mitomiRs) lack spatial selectivity, hindering efficient detection and signal activation.
  • Mitochondria play a vital role in cellular health and disease, making their monitoring essential.

Purpose of the Study:

  • To develop a novel DNA nanoprobe for spatially selective imaging of mitomiRs in living cells.
  • To improve the delivery efficiency of Cas protein for enhanced detection of mitochondrial RNAs.
  • To enable highly sensitive detection of low-abundance mitomiRs using a CRISPR/Cas system.

Main Methods:

  • Construction of a protein delivery nano-corona (PDNC) DNA nanoprobe.
  • Utilizing a CRISPR/Cas system for signal activation and spatially selective imaging.
  • Integration with a single-molecule counting method for enhanced sensitivity.

Main Results:

  • The PDNC nanoprobe demonstrated improved delivery efficiency of Cas protein.
  • Spatially selective imaging of mitomiRs in living cells was achieved.
  • Highly sensitive detection of low-abundance mitomiRs was enabled by the combined strategy.

Conclusions:

  • The developed PDNC strategy offers a novel approach for precise mitomiR detection.
  • This method enhances spatial selectivity and sensitivity for subcellular analysis.
  • The strategy holds potential for cell identification, early clinical diagnosis, and subcellular biological research.