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Lung microRNA Profiling Across the Estrous Cycle in Ozone-exposed Mice
Published on: January 7, 2019
Analysis of Differentially Expressed MicroRNAs in OVA-induced Airway Remodeling Model Mice
Chang Xu1, Yilan Song2, Chongyang Wang3
1Jilin Key Laboratory for Immune and Targeting Research on Common Allergic Diseases, Yanbian University, Yanji, Jilin, China AND Department of Anatomy, Histology and Embryology, Yanbian University Medical College, Yanji, Jilin, China. xuchang199310@163.com.
Abstract:
MicroRNAs (miRNAs) can participate in airway remodeling by regulating immune molecule expression. Here, we aimed to identify the differential miRNAs involved in airway remodeling. Airway remodeling was induced by ovalbumin in female BALB/C mice. The differentially expressed miRNAs were screened with microarray. GO (Gene Ontology) and KEGG enrichment analysis was performed. The miRNA target gene network and miRNA target pathway network were constructed. Verification with real-time PCR and Western blot was performed. We identified 63 differentially expressed miRNAs (50 up-regulated and 13 down-regulated) in the lungs of ovalbumin-induced airway remodeling mice. Real-time PCR confirmed that 3 miRNAs (mmu-miR-1931, mmu-miR-712-5p, and mmu-miR-770-5p) were significantly up-regulated, and 4 miRNAs (mmu-miR-128-3p, mmu-miR-182-5p, mmu-miR-130b-3p, and mmu-miR-20b-5p) were significantly down-regulated. The miRNA target gene network analysis identified key mRNAs in the airway remodeling, such as Tnrc6b (trinucleotide repeat containing adaptor 6B), Sesn3 (sestrin 3), Baz2a (bromodomain adjacent to zinc finger domain 2a), and Cux1 (cut like homeobox 1). The miRNA target pathway network showed that the signal pathways such as MAPK (mitogen-activated protein kinase), PI3K/Akt (phosphoinositide 3-Kinase/protein kinase B), p53 (protein 53), and mTOR (mammalian target of rapamycin) were closely related to airway remodeling in asthma. Collectively, differential miRNAs involved in airway remodeling (such as mmu-miR-1931, mmu-miR-712-5p, mmu-miR-770-5p, mmu-miR-128-3p mmu-miR-182-5p, and mmu-miR-130b-3p) as well as their target genes (such as Tnrc6b, Sesn3, Baz2a, and Cux1) and pathways (such as MAPK, PI3K/Akt, p53, mTOR pathways) have been identified. Our findings may help to further understand the pathogenesis of airway remodeling.
Insights
This study identifies key microRNAs (miRNAs) and their target genes involved in airway remodeling. These findings enhance understanding of asthma pathogenesis and potential therapeutic targets.
Area of Science:
- Molecular Biology
- Immunology
- Genetics
Background:
- MicroRNAs (miRNAs) play a role in regulating immune responses and are implicated in airway remodeling.
- Understanding the specific miRNAs involved in airway remodeling is crucial for deciphering asthma pathogenesis.
Purpose of the Study:
- To identify differentially expressed miRNAs in a mouse model of ovalbumin-induced airway remodeling.
- To construct miRNA target gene and pathway networks to elucidate molecular mechanisms.
Main Methods:
- Ovalbumin-induced airway remodeling in female BALB/C mice.
- Microarray analysis for miRNA screening.
- Gene Ontology (GO) and KEGG pathway enrichment analysis.
- Real-time PCR and Western blot for verification.
Main Results:
- Identified 63 differentially expressed miRNAs (50 up-regulated, 13 down-regulated).
- Confirmed significant expression changes for specific miRNAs including mmu-miR-1931, mmu-miR-712-5p, mmu-miR-770-5p, mmu-miR-128-3p, mmu-miR-182-5p, mmu-miR-130b-3p.
- Identified key target genes (e.g., Tnrc6b, Sesn3, Baz2a, Cux1) and pathways (e.g., MAPK, PI3K/Akt, p53, mTOR).
Conclusions:
- Differential miRNAs, target genes, and signaling pathways are significantly associated with airway remodeling.
- Findings provide insights into the pathogenesis of airway remodeling in asthma.
- Identified molecules may serve as potential therapeutic targets for airway remodeling-related diseases.
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