Single cell sequencing reveals that CD39 inhibition mediates changes to the tumor microenvironment
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Updated: Jun 26, 2026

Enrichment and Characterization of the Tumor Immune and Non-immune Microenvironments in Established Subcutaneous Murine Tumors
Published on: June 7, 2018
Lilong Liu1, Yaxin Hou2, Changqi Deng1
1Department of Urology, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, China.
Abstract:
Single-cell sequencing technologies have noteworthily improved our understanding of the genetic map and molecular characteristics of bladder cancer (BC). Here we identify CD39 as a potential therapeutic target for BC via single-cell transcriptome analysis. In a subcutaneous tumor model and orthotopic bladder cancer model, inhibition of CD39 (CD39i) by sodium polyoxotungstate is able to limit the growth of BC and improve the overall survival of tumor-bearing mice. Via single cell RNA sequencing, we find that CD39i increase the intratumor NK cells, conventional type 1 dendritic cells (cDC1) and CD8 + T cells and decrease the Treg abundance. The antitumor effect and reprogramming of the tumor microenvironment are blockaded in both the NK cells depletion model and the cDC1-deficient Batf3-/- model. In addition, a significant synergistic effect is observed between CD39i and cisplatin, but the CD39i + anti-PD-L1 (or anti-PD1) strategy does not show any synergistic effects in the BC model. Our results confirm that CD39 is a potential target for the immune therapy of BC.
Insights
CD39 is identified as a promising therapeutic target for bladder cancer (BC). Inhibiting CD39 boosts anti-tumor immune cells, limits BC growth, and enhances survival, showing potential for novel BC immunotherapies.
Area of Science:
- Oncology
- Immunology
- Genetics
Background:
- Single-cell sequencing advances understanding of bladder cancer (BC) genetics and molecular profiles.
- Identifying novel therapeutic targets is crucial for improving BC treatment outcomes.
Purpose of the Study:
- To investigate CD39 as a potential therapeutic target for bladder cancer using single-cell transcriptome analysis.
- To evaluate the efficacy of CD39 inhibition (CD39i) in preclinical BC models.
Main Methods:
- Single-cell RNA sequencing was employed to analyze tumor immune microenvironments.
- Preclinical models, including subcutaneous and orthotopic bladder cancer models, were used.
- CD39 inhibition was achieved using sodium polyoxotungstate.
Main Results:
- CD39 inhibition limited BC growth and improved survival in mouse models.
- CD39i increased intratumor natural killer (NK) cells, CD8+ T cells, and conventional type 1 dendritic cells (cDC1), while decreasing regulatory T cells (Tregs).
- Antitumor effects were dependent on NK cells and cDC1s; synergistic effects were observed with cisplatin, but not with anti-PD-L1/PD-1 therapies.
Conclusions:
- CD39 is a viable therapeutic target for bladder cancer immunotherapy.
- Modulating the tumor immune microenvironment via CD39 inhibition holds promise for BC treatment.
- Combination therapy with CD39i and cisplatin may offer a synergistic approach for BC management.
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