Ontogenetic Variation in Macrocyclic and Hemicyclic Poplar Rust Fungi
Zhongdong Yu1, Zijia Peng1, Mei Qi1
1College of Forestry, Northwest A & F University, Xianyang 712100, China.
Abstract:
Melampsora larici-populina (Mlp), M. medusae (Mmed), M. magnusiana (Mmag), and M. pruinosae (Mpr) are epidemic rust fungi in China. The first two are macrocyclic rust fungi distributed in temperate humid environments. The latter two are hemicyclic rusts, mainly distributed in arid and semi-arid areas. Ontogenetic variation that comes with this arid-resistance is of great interest-and may help us predict the influence of a warmer, drier, climate on fungal phylogeny. To compare the differences in the life history and ontogeny between the two types of rust, we cloned mating type genes, STE3.4 and STE3.3 using RACE-smart technology. Protein structures, functions, and mutant loci were compared across each species. We also used microscopy to compare visible cytological differences at each life stage for the fungal species, looking for variation in structure and developmental timing. Quantitative PCR technology was used to check the expression of nuclear fusion and division genes downstream of STE3.3 and STE3.4. Encoding amino acids of STE3.3 and STE3.4 in hemicyclic rusts are shorter than these in the macrocyclic rusts. Both STE3.3 and STE3.4 interact with a protein kinase superfamily member EGG12818 and an E3 ubiquitin protein ligase EGG09709 directly, and activating G-beta conformational changes. The mutation at site 74th amino acid in the conserved transmembrane domain of STE3.3 ascribes to a positive selection, in which alanine (Ala) is changed to phenylalanine (Phe) in hemicyclic rusts, and a mutation with Tyr lost at site 387th in STE3.4, where it is the binding site for β-D-Glucan. These mutants are speculated corresponding to the insensitivity of hemicyclic rust pheromone receptors to interact with MFa pheromones, and lead to Mnd1 unexpressed in teliospora, and they result in the diploid nuclei division failure and the sexual stage missing in the life cycle. A Phylogenic tree based on STE3.4 gene suggests these two rust types diverged about 14.36 million years ago. Although these rusts share a similar uredia and telia stage, they show markedly different wintering strategies. Hemicyclic rusts overwinter in the poplar buds endophytically, their urediniospores developing thicker cell walls. They form haustoria with a collar-like extrahaustorial membrane neck and induce host thickened callose cell walls, all ontogenetic adaptations to arid environments.
Insights
Rust fungi in China exhibit distinct adaptations to arid environments, with hemicyclic rusts showing mutations in mating type genes (STE3.3 and STE3.4) that lead to a missing sexual stage and unique overwintering strategies.
Area of Science:
- Plant Pathology
- Mycology
- Evolutionary Biology
- Climate Change Adaptation
Background:
- Four rust fungi species, Melampsora larici-populina, M. medusae, M. magnusiana, and M. pruinosae, are prevalent in China.
- Macrocyclic rusts inhabit temperate, humid regions, while hemicyclic rusts are adapted to arid/semi-arid areas.
- Understanding ontogenetic variations in arid-adapted fungi is crucial for predicting climate change impacts on fungal evolution.
Purpose of the Study:
- To compare life history and ontogeny differences between macrocyclic and hemicyclic rust fungi.
- To investigate the genetic basis of arid adaptation in hemicyclic rusts, focusing on mating type genes.
Main Methods:
- Cloning of mating type genes (STE3.4 and STE3.3) using RACE-smart technology.
- Comparative analysis of protein structures, functions, and mutant loci.
- Microscopy for cytological differences and quantitative PCR for gene expression analysis (nuclear fusion/division).
Main Results:
- Hemicyclic rusts possess shorter STE3.3 and STE3.4 proteins compared to macrocyclic rusts.
- Specific mutations in STE3.3 (Ala to Phe) and STE3.4 (Tyr loss) in hemicyclic rusts correlate with altered pheromone receptor interactions and failure of sexual reproduction.
- Phylogenetic analysis indicates divergence of the two rust types approximately 14.36 million years ago, with hemicyclic rusts exhibiting endophytic overwintering and enhanced urediniospore cell walls for arid survival.
Conclusions:
- Genetic mutations in mating type genes are key adaptations enabling hemicyclic rusts to thrive in arid environments.
- These adaptations include altered reproductive strategies (loss of sexual stage) and specialized overwintering mechanisms.
- The study provides insights into fungal evolutionary responses to climate change, particularly increasing aridity.
Related Concept Videos
Fungal Group Zygomycota
Fungal Phylum Basidiomycota
Gene Flow
Mutation, Gene Flow, and Genetic Drift
Overview of Fungi
Fungal Phylum Microsporidia


