Deep convolutional neural networks for generating atomistic configurations of multi-component macromolecules from
Eleftherios Christofi1, Antonis Chazirakis2, Charalambos Chrysostomou1
1Computation-based Science and Technology Research Center, The Cyprus Institute, Nicosia 2121, Cyprus.
The Journal of Chemical Physics
|November 15, 2022
Summary
We developed a deep learning method to reconstruct atomistic polymer details from coarse-grained (CG) models. This efficient technique accurately predicts polymer structures, enabling simulations of larger systems.
Area of Science:
- Computational chemistry
- Materials science
- Polymer physics
Background:
- Molecular simulations are limited by computational resources for large systems.
- Coarse-grained (CG) models reduce complexity but lose atomistic detail.
- Reconstructing atomistic detail from CG models is a challenging inverse problem.
Purpose of the Study:
- To introduce an efficient and versatile deep learning method for backmapping multi-component coarse-grained (CG) macromolecules.
- To enable the prediction of atomistic polymer structures from CG configurations.
Main Methods:
- Utilized deep learning, specifically a convolutional neural network (CNN).
- Trained the CNN on structural correlations between atomistic and CG polymer configurations.
- Applied the trained model to predict atomistic structures from CG inputs.
Main Results:
- Demonstrated accurate backmapping for polybutadiene copolymers with varying microstructures (cis-1,4, trans-1,4, vinyl-1,2).
- Showed the methodology's transferability across molecular weights and microstructures.
- Successfully generated diverse, equilibrated polymer configurations by modifying CG chemistry.
Conclusions:
- The deep learning approach provides an efficient and versatile solution for CG model backmapping.
- This method overcomes limitations in simulating large-scale polymer systems at the atomistic level.
- The technique allows for the generation of various polymer microstructures from a single CG input.
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