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Mathematical Modeling of Fluconazole Resistance in the Ergosterol Pathway of Candida albicans
Paul K Yu1,2,3, Llewelyn S Moron-Espiritu1,4, Angelyn R Lao1,3
1Systems and Computational Biology Research Unit, Center for Natural Sciences and Environmental Research, De La Salle University, Malate, Manila, National Capital Region, Philippines.
Abstract:
Candidiasis is reported to be the most common fungal infection in the critical care setting. The causative agent of this infection is a commensal pathogen belonging to the genus Candida, the most common species of which is Candida albicans. The ergosterol pathway in yeast is a common target by many antifungal agents, as ergosterol is an essential component of the cell membrane. The current antifungal agent of choice for the treatment of candidiasis is fluconazole, which is classified under the azole antifungals. In recent years, the significant increase of fluconazole-resistant C. albicans in clinical samples has revealed the need for a search for other possible drug targets. In this study, we constructed a mathematical model of the ergosterol pathway of C. albicans using ordinary differential equations with mass action kinetics. From the model simulations, we found the following results: (i) a partial inhibition of the sterol-methyltransferase enzyme yields a fair amount of fluconazole resistance; (ii) the overexpression of the ERG6 gene, which leads to an increased sterol-methyltransferase enzyme, is a good target of antifungals as an adjunct to fluconazole; (iii) a partial inhibition of lanosterol yields a fair amount of fluconazole resistance; (iv) the C5-desaturase enzyme is not a good target of antifungals as an adjunct to fluconazole; (v) the C14α-demethylase enzyme is confirmed to be a good target of fluconazole; and (vi) the dose-dependent effect of fluconazole is confirmed. This study hopes to aid experimenters in narrowing down possible drug targets prior to costly and time-consuming experiments and serve as a cross-validation tool for experimental data. IMPORTANCE Candidiasis is reported to be the most common fungal infection in the critical care setting, and it is caused by a commensal pathogen belonging to the genus Candida, the most common species of which is Candida albicans. The current antifungal agent of choice for the treatment of candidiasis is fluconazole, which is classified under the azole antifungals. There has been a significant increase in fluconazole-resistant C. albicans in recent years, which has revealed the need for a search for other possible drug targets. We constructed a mathematical model of the ergosterol pathway in C. albicans using ordinary differential equations with mass action kinetics. In our simulations, we found that by increasing the amount of the sterol-methyltransferase enzyme, C. albicans becomes more susceptible to fluconazole. This study hopes to aid experimenters in narrowing down the possible drug targets prior to costly and time-consuming experiments and to serve as a cross-validation tool for experimental data.
Insights
Mathematical modeling of the Candida albicans ergosterol pathway reveals that increasing sterol-methyltransferase enzyme levels enhances susceptibility to fluconazole, offering new strategies against fungal infections.
Area of Science:
- Mycology
- Biochemistry
- Computational Biology
Background:
- Candidiasis, a common fungal infection in critical care, is primarily caused by *Candida albicans*.
- Fluconazole, an azole antifungal, is the standard treatment but faces increasing resistance.
- The ergosterol pathway is a key target for antifungal drugs.
Purpose of the Study:
- To construct a mathematical model of the *Candida albicans* ergosterol pathway.
- To identify potential drug targets for combating fluconazole-resistant candidiasis.
- To aid in narrowing down experimental drug target selection.
Main Methods:
- Development of a mathematical model using ordinary differential equations with mass action kinetics.
- Simulation of the ergosterol pathway in *Candida albicans*.
- Analysis of enzyme inhibition and gene overexpression effects on fluconazole susceptibility.
Main Results:
- Partial inhibition of sterol-methyltransferase and lanosterol pathways can lead to fluconazole resistance.
- Overexpression of the *ERG6* gene (increasing sterol-methyltransferase) enhances susceptibility to fluconazole.
- C14α-demethylase is confirmed as a viable fluconazole target; C5-desaturase is not ideal as an adjunct target.
Conclusions:
- Targeting sterol-methyltransferase, potentially through *ERG6* gene modulation, could be a promising adjunctive strategy with fluconazole.
- Mathematical modeling provides a valuable tool for predicting drug efficacy and guiding experimental research.
- Understanding ergosterol pathway dynamics is crucial for developing new antifungals against resistant strains.
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