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Updated: Aug 20, 2025

Quantification and Whole Genome Characterization of SARS-CoV-2 RNA in Wastewater and Air Samples
Published on: June 30, 2023
SARS-CoV-2 RNA levels in Scotland's wastewater
Livia C T Scorza1, Graeme J Cameron2, Roisin Murray-Williams2
1SynthSys and School of Biological Sciences, University of Edinburgh, Edinburgh, EH9 3JD, UK.
Scotland established nationwide wastewater monitoring to track SARS-CoV-2 RNA levels during the COVID-19 pandemic. This dataset details viral loads from May 2020 to February 2022, aiding disease prevalence and reproduction number estimations.
Area of Science:
- Environmental science
- Virology
- Public health surveillance
Background:
- The COVID-19 pandemic necessitated novel public health surveillance methods.
- Wastewater-based epidemiology emerged as a valuable tool for tracking infectious diseases.
- Scotland implemented a national wastewater monitoring program for SARS-CoV-2.
Purpose of the Study:
- To present a curated, reference dataset from Scotland's national SARS-CoV-2 wastewater monitoring program.
- To detail the methodology and data collected from May 2020 to February 2022.
- To provide data for estimating disease prevalence and the viral reproduction number (R).
Main Methods:
- Wastewater samples were collected from 162 locations nationwide.
- SARS-CoV-2 viral RNA levels were quantified using RT-qPCR assays targeting the N1 gene.
- Data normalization factors including wastewater flow and ammonia concentration were recorded where available.
Main Results:
- A comprehensive dataset of SARS-CoV-2 RNA levels in wastewater was generated.
- Geographical coordinates and catchment population data were collected for each sampling site.
- Methodology for viral quantification and data analysis is described with links to online protocols.
Conclusions:
- The national wastewater monitoring program provides crucial data for public health insights.
- These wastewater data contribute to understanding SARS-CoV-2 prevalence and transmission dynamics.
- The dataset supports ongoing efforts to manage the COVID-19 pandemic in Scotland and the UK.
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