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Efficient labeling of retinal fundus photographs using deep active learning.
Samantha K Paul1, Ian Pan2, Warren M Sobol1
1University Hospitals Cleveland Medical Center, Case Western Reserve University School of Medicine, Department of Ophthalmology, Cleveland, Ohio, United States.
Journal of Medical Imaging (Bellingham, Wash.)
|November 21, 2022
Summary
Deep active learning (DAL) methods significantly improved diabetic retinopathy classification performance, especially for multiclass tasks. Uncertainty-based and feature descriptor-based approaches enhanced label efficiency compared to random sampling.
Area of Science:
- Ophthalmology
- Artificial Intelligence
- Medical Imaging
Background:
- Diabetic retinopathy (DR) classification relies on deep learning models.
- Labeling large datasets for DR classification is time-consuming and expensive.
- Optimizing label efficiency is crucial for developing robust DR detection systems.
Purpose of the Study:
- To compare the performance of four deep active learning (DAL) approaches.
- To optimize label efficiency in training deep learning models for diabetic retinopathy (DR) classification.
Main Methods:
- Utilized 88,702 retinal fundus images from 44,351 patients (EyePACS dataset).
- Compared four DAL methods (entropy sampling, BALD, core set, adversarial) against random sampling.
- Evaluated models using Cohen's kappa (CK) and AUC on internal and independent test sets.
Main Results:
- Three of four DAL methods significantly improved multiclass DR classification (CK differences: 0.051-0.053).
- Improvements generalized to an independent test set (CK differences: 0.126-0.135).
- No significant improvements were observed for binary classification; ADV performed similarly to random sampling.
Conclusions:
- Uncertainty-based and feature descriptor-based DAL methods outperform random sampling for multiclass DR classification.
- DAL enhances label efficiency for training DR classification models.
- Binary classification performance did not benefit from DAL methods in this study.

