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PrimSeq: A deep learning-based pipeline to quantitate rehabilitation training
Avinash Parnandi1, Aakash Kaku2, Anita Venkatesan1
1Department of Neurology, New York University Langone Health, New York, United States of America.
PLOS Digital Health
|November 24, 2022
Summary
A new tool, PrimSeq, accurately counts functional motions during stroke rehabilitation. This method can help determine optimal training doses for better upper extremity recovery in patients.
Area of Science:
- Neurorehabilitation
- Biomedical Engineering
- Machine Learning
Background:
- Stroke rehabilitation aims to improve motor function through training, but optimal training doses remain unclear due to measurement challenges.
- Animal studies suggest high volumes of functional motion training significantly enhance upper extremity recovery post-stroke.
- Current methods lack practical tools to quantify functional motions during human rehabilitation, hindering dose-response studies.
Purpose of the Study:
- To introduce PrimSeq, a novel pipeline for classifying and quantifying functional motions in stroke rehabilitation.
- To enable accurate measurement of training doses for upper extremity recovery after stroke.
- To overcome limitations in current methods for assessing rehabilitation activity.
Main Methods:
- Integration of wearable sensors to capture upper-body kinematics.
- Application of a deep learning model for predicting motion sequences from sensor data.
- Development of an algorithm to classify and count elemental functional motions within rehabilitation activities.
Main Results:
- PrimSeq accurately decomposes complex rehabilitation activities into discrete functional motions.
- The pipeline demonstrates superior performance compared to existing machine learning approaches.
- Quantification of motions by PrimSeq is significantly faster and more cost-effective than manual expert analysis.
- Successful validation of PrimSeq on stroke patients with varying degrees of upper extremity impairment.
Conclusions:
- PrimSeq offers a practical and accurate solution for measuring functional motion doses in stroke rehabilitation.
- This methodology is crucial for advancing quantitative dosing trials to optimize upper extremity recovery.
- The tool has the potential to standardize and improve the efficacy of stroke rehabilitation training.

